Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2546 141 1e-28 seq3272 114 2e-20 >seq2546 Length=134672 Score = 141 bits (156), Expect = 1e-28 Identities = 889/1407 (63%), Gaps = 47/1407 (3%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | ||||| || || ||||| || || |||| ||| || | |||||| Sbjct 38916 TAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGAGGTGGAA 38975 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || |||||||| || || | | ||| ||| || | ||| | || ||| || Sbjct 38976 GCAGTTGGCATGGGAGCGACGAGAAGCGAGTTGCGGACACCATGCTCGGCGATCTTGGCC 39035 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAA 106112 ||||| | ||||||| || || | | || |||| ||||||| || |||||| Sbjct 39036 TTGAGTGCGGCCCAGTCCCAGA-GATCAGTAGGAGTCACAC-CCCACATGTCGTATTGAA 39093 Query 106113 GCAC-CCCTTGG-GACGTGGGAGAACCCTCAAATGTCTCATAGG----AACCTTGGGCTT 106166 || | ||||||| |||| ||||| ||||| ||||||| || | || ||||| Sbjct 39094 GCTCGCCCTTGGAGACG--GGAGAGCCCTCGTATGTCTCGTATGGTCCAAGCTTGG---- 39147 Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 |||| | || || || || | ||||| || ||||| || ||||| || | Sbjct 39148 CAGCGAGATCGCATGAAGCGGTGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGT 39207 Query 106227 TCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATC 106281 | | || ||| ||| || || || |||| || | || ||| |||| Sbjct 39208 TGAGCTGACGGGCCTCAGGAGAGTCGAAAGGCATGCGAAGAGCCAAGAAAG-----CATC 39262 Query 106282 CGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGT 106341 || ||||| | ||||| | ||| || || | || || | || ||| || || | Sbjct 39263 GGCAAGACCATTGACACCGAGACCGATGGGACGATGACGGAAGTTGCTCTTGCGAGCC-T 39321 Query 106342 CTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTG 106400 || || || || || || |||| ||| | || ||||| || ||| || Sbjct 39322 CTGGCACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTCTGTG 39381 Query 106401 TGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT-CTCTTCATTGACATACTTTGGA 106459 ||| | ||||| |||||| | || || | || || ||| | |||||| | ||| Sbjct 39382 TGACCTGGTGAAGCTTTTCAAAGTCGAA-GCGCTCGTTCTCGATGTCGACATAGGTGGGA 39440 Query 106460 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 106519 || |||| ||||| | ||||| || || |||||| | | |||||||| | || Sbjct 39441 AGAGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATC 39500 Query 106520 TCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTG 106579 || || || | |||||| || || || ||||||||||| ||||| ||||| |||| Sbjct 39501 TCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAAATTCTTCTGGTTGCTCTTGCCGTTG 39560 Query 106580 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCC 106639 || |||||||| || || || ||||| || ||||| || || | || ||| || || Sbjct 39561 GCAGCGTCCTTGTAAAGGATATATGGCGTGCCGGTCTCGGTTTGAGCCTCGAGGATGGCA 39620 Query 106640 TTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTG 106697 | ||| | | || | || | || | | | ||| | ||||| |||||| Sbjct 39621 TACCAGAGCTTCTG-AGCGCGGACGGTCTC-ACGACCCTTGCCCTCACGCTCGTATCGCT 39678 Query 106698 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 106757 ||| || | || ||||| | || | || | ||||| || || || || | Sbjct 39679 CGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGC 39738 Query 106758 AGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 106817 | | | || ||| | | |||||| ||||||||||| || ||||| | ||||| Sbjct 39739 ACATCAAAGTCCAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGATCTGGGACCCACA 39798 Query 106818 GGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAA 106877 | | || ||||| | | ||| |||| || | || ||||| || | || | Sbjct 39799 GACCGTAGAACAGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCA 39858 Query 106878 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA------GACTGCGATAGATCCCT 106931 ||| | || ||| |||||||||||||| | || | ||| || || || Sbjct 39859 AGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCAAAGGCGCCAGGTCGCT 39918 Query 106932 T-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 106990 | | | ||||| || | || ||||| || ||| |||||| || || ||||| || Sbjct 39919 TATTGCCGCCC----TGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGT 39974 Query 106991 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 107050 | | ||| | ||| || || || || | || | | | || | | Sbjct 39975 ACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGCGCGAATTCTG 40034 Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110 |||| || | |||||| || || || ||| ||||| || || | | || || Sbjct 40035 TGGACGTTGAGCCCAATGCCTCCGGCGTTCTTAGAGATCATGGCGCAGGTCTTCAGTGTG 40094 Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170 | ||||| || | || ||| ||||| || |||| |||||||| | || ||| Sbjct 40095 TCGTAGATCCCATCAATACTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGA 40154 Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGA 107229 | | ||||| |||||| |||| || || || | || || |||| ||| | | || Sbjct 40155 GCGTTGGGTGTTCCAGCACTGAACAGCGTGGGCGACGCATGTGTGAA-GTACTTGTTCGA 40213 Query 107230 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCAC 107289 ||| | || ||| ||||| | | |||| |||||||| || |||||||| || | ||||| Sbjct 40214 CATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCCTCGCCGTGGATTCCCACAGCCAC 40273 Query 107290 ACGCATAAACATGTATTGGGGTGTTTC 107316 |||||| | ||| | ||| ||| |||| Sbjct 40274 ACGCATGATCATCTGTTGTGGTCTTTC 40300 >seq3272 Length=75414 Score = 114 bits (126), Expect = 2e-20 Identities = 524/817 (64%), Gaps = 23/817 (3%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| || || |||||||| |||||||| ||||| || | || ||||| ||||| Sbjct 16190 TAGTCACCGACACGCTTCTCGAAGAAGTTCGTCTTGCCTCCGAGAGAGATGTTCTCCATG 16249 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 || || || || || | ||||| | ||| || || | | ||||| Sbjct 16250 AAATCGAAGGGGTTGGTGGCGTTGTAGTGCTTCTGGTTG-----CCGAGTGCCAGGAGGA 16304 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 ||||||| | || |||| ||||| | | |||| || | |||||| |||| ||| Sbjct 16305 GACGATCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCG 16364 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||||||||| ||||| || |||| | | ||| || | || ||||| | | |||| Sbjct 16365 CACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATGATGT 16424 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 117280 | | | || | | | || | || | | ||| ||| |||||| | Sbjct 16425 CTTCAACCACTTGGTTTGATGGCTTGTTGTTGAGATGAGAGAACAGCAGGCAGGCAAAGT 16484 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 | ||| | |||||||| |||||||| || || || ||||| ||||| ||||||| Sbjct 16485 CGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAAGTGAGGCCAGGCATGA 16544 Query 117341 GACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCC 117399 |||| |||||||||||||| | || | ||| ||| || |||||||||||||| || || Sbjct 16545 GACCACGCTTCTTCAACCAGAAGATCGACGC-GAAAGATCCGGAGAAGAAGATGCCTTCG 16603 Query 117400 ACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTT 117458 | ||||| || | || || ||| |||| | ||| |||| | | |||| Sbjct 16604 ATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTG-GAGTTCTTGTCGGAGATCCATCG 16662 Query 117459 CATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTG 117518 || ||||| | |||||||| || ||||| | | | |||||| | || | | Sbjct 16663 CAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAGGTA 16722 Query 117519 C-TTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCAT 117577 | | | || | | || | |||||| |||| || | || ||||| ||| | Sbjct 16723 CGTGCGTTGCTTGGGC-TCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGT 16781 Query 117578 GAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACT 117636 | | | | ||| ||| | || | ||||||| |||| || ||| || |||||| Sbjct 16782 GGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCAGCGGGCCTCGGGGATTTGCACT 16840 Query 117637 TCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAA 117695 || ||||| || | | ||| ||||| || || ||||| || |||| ||||| Sbjct 16841 TC-TCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGCGAAGAA 16899 Query 117696 TGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTCGTC 117752 ||||||| || ||||| || | || |||||| | |||||||||| Sbjct 16900 GGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAGGCGCTTGTTCCAGTCGTG 16959 Query 117753 AAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 117789 ||| || ||||| | ||| | || || ||||||||| Sbjct 16960 AAGGTCCTTGGAGAGATCGATCTCCTCGGCAGTCCAA 16996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589955873311200