Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1737 93.3 5e-14 >seq1737 Length=160405 Score = 93.3 bits (102), Expect = 5e-14 Identities = 173/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATG 154930 ||| ||||| ||||||||||| ||| ||||| || || | | | | || || Sbjct 59039 TATCATGATCACATACCCATCCACATTCGGTGTGTTCGAGCCGCAGGTCAAGGAGGCCTG 59098 Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990 | || |||||| | | || || || ||||| | || || || || | || ||||| Sbjct 59099 CGACATTGTTCATAAGCACGGCGGACAAGTATACATGGACGGCGCCAACATGAACGCACA 59158 Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050 | | || || || | ||| ||| || ||||| || || | ||| | || || Sbjct 59159 GATTGGTCTCTGCTCGCCTGGCGAGATTGGCGCGGATGTGTGCCACTTGAACCTCCACAA 59218 Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAA 155110 || ||||| ||||| ||||| ||||| || || ||||| ||||| || ||||||||||| Sbjct 59219 GACTTTCTGCATTCCGCATGGTGGTGGTGGCCCCGGCGTCGGTCCGATCGGTGTAGCAAA 59278 Query 155111 ACATCTCACACCAT 155124 |||||| | |||| Sbjct 59279 GCATCTCTCTCCAT 59292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579188328259200