Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1737 107 2e-18 >seq1737 Length=160405 Score = 107 bits (118), Expect = 2e-18 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATG 159605 ||| ||||| ||||| ||||| ||| ||||| || || | | ||| || || Sbjct 59039 TATCATGATCACATACCCATCCACATTCGGTGTGTTCGAGCCGCAGGTCAAGGAGGCCTG 59098 Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665 | ||||||||| || | || || || ||||| | || || || || | || ||||| Sbjct 59099 CGACATTGTTCATAAGCACGGCGGACAAGTATACATGGACGGCGCCAACATGAACGCACA 59158 Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725 | | ||||| || | || ||| || ||||| || || | ||| | || || Sbjct 59159 GATTGGTCTCTGCTCGCCTGGCGAGATTGGCGCGGATGTGTGCCACTTGAACCTCCACAA 59218 Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAA 159785 ||| ||||| ||||| ||||| ||||| || || ||||| ||||| || ||||||||||| Sbjct 59219 GACTTTCTGCATTCCGCATGGTGGTGGTGGCCCCGGCGTCGGTCCGATCGGTGTAGCAAA 59278 Query 159786 ACATCTCACACCAT 159799 |||||| | |||| Sbjct 59279 GCATCTCTCTCCAT 59292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588026354836800