Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2317 138 3e-27
seq2215 100 6e-16
>seq2317
Length=245020
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || ||||| |||||||| || ||||| ||||| |||| || || | || || ||
Sbjct 71448 ACGAGATGAAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCA 71507
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || |||||||| | ||| ||||||||||| |||||||| || ||||| ||
Sbjct 71508 AGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 71567
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || ||||||||||| ||||| || | ||| | ||||||
Sbjct 71568 ATCTTCGACTTGACATTGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTG 71627
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 71628 CCAGTGAGGGTCTTGACGAAGATCTGCAT 71656
Score = 131 bits (144), Expect = 4e-25
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||||||||| || || || ||||| ||| || || | |||||| || || ||
Sbjct 71681 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGCCCATCCTCAAGTTG 71740
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || ||||||||||||||||| || ||||| || || ||
Sbjct 71741 CTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTT 71800
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || || ||||| ||||| || || |||||||| | |||||||| ||
Sbjct 71801 GCTCTTCACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTGATGGTCTTTCCAGT 71860
Query 195117 CA 195118
||
Sbjct 71861 CA 71862
>seq2215
Length=151005
Score = 100 bits (110), Expect = 6e-16
Identities = 93/118 (79%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | ||| || || ||||| || || || ||||| |||| || |||| || || ||
Sbjct 66719 AACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTC 66778
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||||||||| || |||||||| || || |||||||| || ||||||||||| ||||||
Sbjct 66779 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGTGGAATGCCTTCCTTGTCT 66836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109433552512460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |