Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2317 100 2e-16 >seq2317 Length=245020 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||||| || ||||||||||| ||||| ||||| |||| | || || Sbjct 71220 ACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGCGTTCGGCCGTCCTCA 71279 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || || ||||| | || | ||||||||||| Sbjct 71280 AGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGTGGGATACCCTCCTTGTCTTGG 71339 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| || ||| | || | || | ||| || |||| || || || || Sbjct 71340 ATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTCCACTTCGAGTGTGATAGTCTTG 71399 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || ||||| |||||| Sbjct 71400 CCGGTGAGTGTCTTGACGAAGATTTGCATA 71429 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || || | || | || || || || || ||||| || Sbjct 71466 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAG 71525 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||| || |||||| | || | ||||||||||| |||||| ||||| || Sbjct 71526 ATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGAC--AT 71583 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | ||| || || | ||| || || || || ||||| ||||| Sbjct 71584 --TGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCAGTGAGGGTCTT 71641 Query 34967 CACAAAGATCTGCATA 34982 || |||||||||||| Sbjct 71642 GACGAAGATCTGCATA 71657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324620227124640