Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq958 109 4e-19 >seq958 Length=118480 Score = 109 bits (120), Expect = 4e-19 Identities = 194/277 (70%), Gaps = 16/277 (6%) Strand=Plus/Plus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT----GTACTCTGCTCC 30170 || |||||||| ||| | || | ||||| || ||| | || |||||| ||||| Sbjct 101235 AGTTGATCCACGCCCTTTCCTGTATAGTCCGC----ATGGCAGTCTTCGTACTCGGCTCC 101290 Query 30171 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30230 |||||||| ||| || || || ||||| || |||| ||||||||||| ||||| || || Sbjct 101291 GAAATGCCGCCATTGAAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTG-TCCAA 101349 Query 30231 GCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT--T 30287 | || | ||||||| | ||||| || || ||| | |||||||| | || || | Sbjct 101350 GTCCTACGCTGTCCAAGTATTCTCTTGAGCCATTGCCATCCCAGATATGCACGTTCTGGT 101409 Query 30288 CTCGGAG-AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGA 30346 || | || ||| |||| ||| || || || || ||||||| |||||| | | || Sbjct 101410 CTTGTAGCAGC---TTGGCGTTGGTCGAGCCGGCCACAAACCACAACAGCTCGGCGAGGA 101466 Query 30347 CGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | || | ||||| | |||||| |||||||| || Sbjct 101467 CAGCTCTTAGGAAGACTCGCTTGGTGGTGAGGAGTGG 101503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408600767508740