Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq3210 93.3 6e-14 >seq3210 Length=31215 Score = 93.3 bits (102), Expect = 6e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 197418 CTTGTTGACCTGAGACACTCCGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTG 197477 |||||||||| ||| | ||||||| || | | |||||| |||||||||||||| | Sbjct 6646 CTTGTTGACCAGAGCCGAGCCGTTCAGATAGAGAATGTCAAAGGCAAAGACGCACACTTT 6705 Query 197478 GACGGTTATCTCTTCTTCCTTGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGG 197537 ||| | | ||||| | |||||||| || || | |||| || | ||||||||| Sbjct 6706 GACTTTGACGTCTTCCGCTTTGACATCCTTCTTCTTGCGGGTCATGAGTTGTTGAAAGGG 6765 Query 197538 AAGGATCTGCTTCTTCTCAACGTCCCAAGCAACTGCCTC 197576 |||| ||||||||||| || ||||| || || | ||| Sbjct 6766 GAGGACGTGCTTCTTCTCCACATCCCACGCCACAGTCTC 6804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676701008174400