Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3272 279 1e-69 seq2546 248 2e-60 >seq3272 Length=75414 Score = 279 bits (308), Expect = 1e-69 Identities = 578/849 (68%), Gaps = 26/849 (3%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 16187 TGGTAGTCACCGACACGCTTCTCGAAGAAGTTCGTCTTGCCTCCGAGAGAGATGTTCTCC 16246 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTG--TCAGG---CCCATCTGTTCCA 47954 ||||| ||||||||||| | ||| || ||| || || || | || ||| Sbjct 16247 ATGAAATCGAAGGGGTTGGTGGCGTTGTA-----GTGCTTCTGGTTGCCGA---GTGCCA 16298 Query 47955 GCAGGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTA 48011 | ||| || || |||||| |||||||||||| ||||||| || |||||| || | Sbjct 16299 GGAGGAGACGATCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGA 16358 Query 48012 TGAGGG-ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCC 48070 ||| | ||| ||| | || | |||||| ||||||| ||| || || || || Sbjct 16359 GGAGCGCACATGGG-AGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTG 16417 Query 48071 ACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130 | || | | ||| | ||| || |||||| || || | | |||| | Sbjct 16418 ATGATGTCTTCAACCACTTGGTTTGATGGCTTGTTGTTGAGATGAGAGA---ACAGCAGG 16474 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||||| ||| || || ||| |||||| |||||||||| ||| Sbjct 16475 CAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAAGTGAGG 16534 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||||| || | || || | |||||| || | ||||||||| || ||||||||| Sbjct 16535 CCAGGCATGAGACCACGCTTCTTCAACCAGAAGATCGACGCGAAAGATCCGGAGAAGAAG 16594 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 ||||| || | || || || ||| |||| | | || | | ||||||||| ||| Sbjct 16595 ATGCCTTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTGGAGTTCTTGTCGGAG 16654 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| ||||||||||| |||||||| ||||||||| || | || ||||| | Sbjct 16655 ATCCATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTG 16714 Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGC-AACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 ||||| | | ||| | | || | ||| | || || || || | ||| | Sbjct 16715 AAGAGGTACGTGC-GTTGCTTGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGT 16773 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 ||| ||||| | ||||| || ||||||||| ||||||||| | |||||| | Sbjct 16774 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGAT 16833 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 ||||||||| | ||| | ||| | || ||||| ||||| || ||||| |||||||| Sbjct 16834 TTGCACTTCTCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGC 16893 Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA-GAGC--ATTCCA 48606 |||||||| ||||| || | ||| |||||||| || | | | | || ||||| Sbjct 16894 GAAGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAGGCGCTTGTTCCA 16953 Query 48607 GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666 | | || | ||| ||| || || | || || ||||||| ||||| || || || Sbjct 16954 GTCGTGAAGGTCCTTGGAGAGATCGATCTCCTCGGCAGTCCAAAAGGAGGCCTCGGCCTT 17013 Query 48667 TTTGTACAT 48675 |||||||| Sbjct 17014 CTTGTACAT 17022 >seq2546 Length=134672 Score = 248 bits (274), Expect = 2e-60 Identities = 1201/1879 (64%), Gaps = 82/1879 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || ||| || ||| ||||||| || ||||||||||| ||||| Sbjct 38535 ACGGTGAACTGAATGGGCGCAGACGCCGCCATGGTGCGAAGGTAGTACATGCCAGTCTTC 38594 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 ||||| ||| ||||||| | |||||| |||| ||| |||| | || Sbjct 38595 AGGCCGAGCTT---CCAGCCGGCGAAGTGCAT-GCTGGTGA---TCTTGCCC-----ATG 38642 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 ||| | | || || || | ||||||| |||| ||| || ||||| | | Sbjct 38643 GTGGGCTCCTTCATG-------TGGATGTTCAGGCTCTGAGACTGATCGATGAAAGCACC 38695 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | |||||||| ||| | | ||| | | |||| || |||||| |||||||| | | Sbjct 38696 ACGGTCAGCGGACATTTGGACGATGTGGCGCTGGCTGATCTCCCAGACGGTCTTATACAG 38755 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848 | |||||||| || || | | ||| || ||| | || || | || | | | Sbjct 38756 AGCCTTGAGGTCGTCGGGAATGTTGGGAATTCGCTGGATGGAACCACC----ATCGGC-G 38810 Query 212849 CTGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCA 212901 || | ||| ||||| || ||| ||||| | | || ||| | ||||| || Sbjct 38811 ATG-ATGCGGTTCTTCATGTTGTCTGACCACAGGCCAC-GCTCAACCAAGTCCTTGAGCA 38868 Query 212902 GGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAG 212961 |||||||| | ||||| ||||| | |||||| | | ||| | ||| | Sbjct 38869 ACCATGGGTTGACAACTTGGAACTCACCAGCGAGCACACGACGGGAGTAGATGTTGCTGG 38928 Query 212962 TGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGG 213021 |||| ||||||| || ||||||| |||| ||||| | ||| || || ||||||| Sbjct 38929 TGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGAGGTGGAAGCAGTTGGCATGG 38988 Query 213022 GAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCC 213081 |||| || || || ||| | || || |||||| |||| | | || | |||| Sbjct 38989 GAGCGACGAGAAGCGAGTTGCGGACACCATGCTCGGCGATCTTGGCCTTGAGTGCGGCCC 39048 Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGAT-G 213140 ||||||| ||| ||| |||| ||||||||| | || ||| | | Sbjct 39049 AGTCCCAGAGATCAGT-AGGAG--------TCACACCCCACATGTCGTATTG-AAGCTCG 39098 Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 || ||| ||||| ||||| ||| | ||| || ||| ||| || || ||| Sbjct 39099 CCCTTGGAGACGGGAGAGCCCTCGTATGTCTCGTATGGTCCAAGCTTGGCAGCGAGATCG 39158 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 || || || || ||||||| ||||||||| || || |||| ||||||||| | Sbjct 39159 CATGAAGCGGTGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTGACGG 39218 Query 213261 GCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACC 213320 ||||| || || ||| ||||| | ||| |||| || || || | ||| Sbjct 39219 GCCTCAGGAGAGTCGAAAGGCATGCGAAGAGCCAAGAAAGCATCGGCAAGACCATTGACA 39278 Query 213321 CCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAA 213379 |||| |||||||| | || | | ||| |||| |||| ||| || ||||| Sbjct 39279 CCGAGACCGATGGGACGATGACGGAAGTTGCTCTTGCGAGC-CTCTGGCACTGGGTAGTG 39337 Query 213380 GTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA 213439 |||| |||||||||||||| | ||| |||| | | ||||| ||| || | Sbjct 39338 GTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTCTGTGTGACCTGGTGAAGCTT 39397 Query 213440 CTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAG 213499 || | ||| | | | || | ||| | || || |||| || || Sbjct 39398 TTCAAAGTCGAAGCGCTCGTTCTCGATGTCGACATAGGTGGGAAGAGCGAGAGATGCAAG 39457 Query 213500 GTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCT 213559 |||||| ||||| ||||| | || | |||||||| |||||||||||||| |||||| Sbjct 39458 GTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGTGCAGAGGTTGGA 39517 Query 213560 GCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAG 213619 || |||||||| |||| |||| ||||| ||| ||||||||| |||||||| || Sbjct 39518 GCTGCGGATGGTTCCCAAATTCTTCTGGTTGCTCTTGCCGTTGGCAGCGTCCTTGTAAAG 39577 Query 213620 CATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTG 213677 || || || | |||||||| || | | | || || ||| |||||| | | Sbjct 39578 GATATATGGCGTGCCGGTCTCGGTTTGAGCCTCGAGGAT--GGCATACCAGAGCTTCTGA 39635 Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTT 213736 || ||| | || || | | | | | | |||||| | ||||| ||||| | Sbjct 39636 GCGCGGACG----GTCTCACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAGCTCCTC 39691 Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGA-TGCGGGACACATGAGGCTCC 213795 ||| || ||| |||| |||| || || || || ||| ||||| | ||| Sbjct 39692 GAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGG-CACATCAAAGTCC 39750 Query 213796 AGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAAC 213854 || | | ||| || | || |||||| || || ||||||||||| || |||| Sbjct 39751 AGGTGGTATTTTGCTCA-ACACGCTTCATGAAGAGATCTGGGACCCACAGACCGTAGAAC 39809 Query 213855 AGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914 || || | | | ||| ||| ||| ||| ||||| ||||| | ||| ||| Sbjct 39810 AGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAAG 39869 Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCC 213971 | || |||||||| ||||| ||||| |||||||||||||| | || | ||||||||| Sbjct 39870 ACATCTGCGTGCCATGGCTCGATGTACATGGCAAAGGCGCCAGGTCGCTTATTGCCGCCC 39929 Query 213972 TGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGAC 214031 ||||| || | || |||| || | ||||| | |||||| || |||||||| Sbjct 39930 TGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGAT 39989 Query 214032 TGTCCGTTGGTTCCCGCT-ATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCC 214090 |||||||| | ||||| || || | |||| || | | || | | |||||| Sbjct 39990 GTTCCGTTGG-TGCCGCTGATGTATGCTCCGGTTGCGCGAATTCTGTGGACGTTGAGCCC 40048 Query 214091 TATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGC 214150 ||||| ||||||| ||| ||||||||||||||| | ||| || || ||| || | Sbjct 40049 AATGCCTCCGGCGTTCTTAGAGATCATGGCGCAGGTCTTCAGTGTGTCGTAGATCCCATC 40108 Query 214151 CATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCC 214210 || |||||||| | | || | | ||||||| | ||||| | ||| | || Sbjct 40109 AATACTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGGGTGTTCC 40168 Query 214211 AGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGT 214270 || |||| |||||||| ||||| | | ||||||| || | | ||||||| Sbjct 40169 AGCACTGAACAGCGTGGGCGACGCATGTGTGAAGTACTTGTTCGACATGTAGTTGTAGGT 40228 Query 214271 CTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGT 214329 ||| | | | || ||||| | |||||| | ||| ||| | ||| | ||| | Sbjct 40229 CTCAATGGCAGACTCAATGTCCTCGCCGTGGATTCCCACAGC-CACACGCATGATCATCT 40287 Query 214330 GCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTGAGC------AGGTAGGAGCGCTCCA 214383 | || || ||| | | |||| ||| |||| | ||||| || | ||||| Sbjct 40288 GTTGTGG--TCTTTCGGCAACCTT----GCCATTGATCCTCAAAAGGTATGACCTCTCCA 40341 Query 214384 GAGTCTTGAACCCAAAGTA 214402 | ||||||||||| ||||| Sbjct 40342 GCGTCTTGAACCCGAAGTA 40360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931493442739200