Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1737 89.7 6e-13 >seq1737 Length=160405 Score = 89.7 bits (98), Expect = 6e-13 Identities = 172/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 138163 ATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTG 138222 |||| | |||||| ||||||||||| || ||||| ||||| || || ||||| ||||| | Sbjct 59292 ATGGAGAGAGATGCTTTGCTACACCGATCGGACCGACGCCGGGGCCACCACCACCATGCG 59233 Query 138223 GAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTT 138282 |||| ||||| ||||| || | || | || || ||||| || ||| || | || Sbjct 59232 GAATGCAGAAAGTCTTGTGGAGGTTCAAGTGGCACACATCCGCGCCAATCTCGCCAGGCG 59173 Query 138283 TTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGT 138342 ||||| | |||||| || | || || || || | ||||| || || || | | Sbjct 59172 AGCAGAGACCAATCTGTGCGTTCATGTTGGCGCCGTCCATGTATACTTGTCCGCCGTGCT 59113 Query 138343 CATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGAT 138402 |||||| || | || || ||| | | || || ||||| || ||||| | Sbjct 59112 TATGAACAATGTCGCAGGCCTCCTTGACCTGCGGCTCGAACACACCGAATGTGGATGGGT 59053 Query 138403 ATGTAATCATAATA 138416 |||| ||||| ||| Sbjct 59052 ATGTGATCATGATA 59039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578973937317600