Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3272 154 2e-31 seq2546 136 5e-26 seq3045 123 3e-22 seq2411 114 2e-19 >seq3272 Length=75414 Score = 154 bits (170), Expect = 2e-31 Identities = 222/313 (71%), Gaps = 0/313 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||| |||||||| |||| ||||| Sbjct 16181 GCCTTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTCGTCTTGCCTCCGAGAGAGATG 16240 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||||||| | | ||||| | | | Sbjct 16241 TTCTCCATGAAATCGAAGGGGTTGGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAGG 16300 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || || |||||||| ||||||||||| ||||||||||| ||||||||| |||| | Sbjct 16301 AGGAGACGATCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGG 16360 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 ||||| || || | || | | ||||| | |||||| |||| |||||| |||| Sbjct 16361 AGCGCACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATG 16420 Query 868931 ATCTGCCTGGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCA 868990 || | ||| | | || ||||||||| ||| | | | |||||||||||| Sbjct 16421 ATGTCTTCAACCACTTGGTTTGATGGCTTGTTGTTGAGATGAGAGAACAGCAGGCAGGCA 16480 Query 868991 AAGTCGCAGTGCA 869003 |||||| ||||| Sbjct 16481 AAGTCGGTGTGCA 16493 Score = 122 bits (134), Expect = 1e-21 Identities = 192/268 (72%), Gaps = 13/268 (5%) Strand=Plus/Plus Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-CGCA 869259 |||||| || | |||||| |||||||| || |||||||| | ||| ||||| | ||| Sbjct 16517 TCGTTGGAGAAAGTGAGGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATCGACGC- 16575 Query 869260 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAA 869319 |||| || ||||| |||||||| |||| |||||||||| ||||||| || |||||| Sbjct 16576 GAAAGATCCGGAGAAGAAGATGCCTTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAA 16635 Query 869320 GGTGTCGAGGCCCTCCTTGTTG---ATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCAC 869376 |||| ||| | ||||| | ||||| || ||||||||| ||||| || | | Sbjct 16636 GGTG--GAG----TTCTTGTCGGAGATCCATCGCAGCGCCCAGTCAGCCTTCTTACGGAT 16689 Query 869377 CGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACAT 869435 | || | ||||||||||| ||||||| || | || | || || ||| | Sbjct 16690 GCATGGGATGTTGTCGATGGCGTTGAAGAGGTACGTGCGTTGC-TTGGGCTCGCTGATGT 16748 Query 869436 AGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | |||||||| ||||| || || ||||| Sbjct 16749 ATGTGTCGATGAGGAGGGAGTATGTCTC 16776 Score = 109 bits (120), Expect = 7e-18 Identities = 175/251 (70%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 16778 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATTTGC 16837 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||| || || ||||||||| |||||||| || || ||||| Sbjct 16838 ACTTCTCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGCGAAG 16897 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCT---GAGCGACACCCAGTGG 869809 || ||||||||||| ||| ||| ||||||||||||| | | || ||||| | Sbjct 16898 AAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAGGCGCTTGTTCCAGTCG 16957 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 ||| | ||| || | ||||||||| ||||| | |||||||||||||| ||| Sbjct 16958 TGAAGGTCCTTGGAGAGATCGATCTCCTCGGCAGTCCAAAAGGAGGCCTCGGCCTTCTTG 17017 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 17018 TACATTTGCCA 17028 >seq2546 Length=134672 Score = 136 bits (150), Expect = 5e-26 Identities = 212/303 (70%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || ||||||||||||||| || |||| |||||| || || |||||||| ||||| ||||| Sbjct 39926 GCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTT 39985 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||| ||||||||||| | ||| || |||| ||||| | |||| || | Sbjct 39986 GGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGCGCGAATTCTGTGGACGTTGAG 40045 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 || ||||| ||||| ||| ||||| | ||||| || || ||||||||||| || Sbjct 40046 CCCAATGCCTCCGGCGTTCTTAGAGATCATGGCGCAGGTCTTCAGTGTGTCGTAGATCCC 40105 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 || || ||| |||||||||| | ||| ||||| || | || | || | || Sbjct 40106 ATCAATACTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGGGTGT 40165 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361 || || |||| |||||||||| ||| ||||| ||| ||||||| || ||| Sbjct 40166 TCCAGCACTGAACAGCGTGGGCGACGCATGTGTGAAGTACTTGTTCGACATGTAGTTGTA 40225 Query 1630362 GGT 1630364 ||| Sbjct 40226 GGT 40228 Score = 109 bits (120), Expect = 7e-18 Identities = 119/157 (76%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||||||||| || || ||||| ||| ||| || | |||||||| ||| Sbjct 28051 GACAGCATCGGCGGCACCGTCACTTGCGTCATTCGAAACTGTCCCTCCGGCCTCGGTGAG 28110 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || || || ||||| |||| ||| | ||||| ||||||||||| ||||| || ||| Sbjct 28111 CCCTGTTTCGACAAACTCGAAGCCACCCTCGCACACGCCATGCTCAGCATCCCTGCGACC 28170 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 || |||||||| || ||| ||| || |||| |||| Sbjct 28171 AAAGGATTCGAAATCGGCTCCGGATTCGGCGGATGCG 28207 Score = 98.7 bits (108), Expect = 1e-14 Identities = 158/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 1627296 CCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGTTGACCACGGTAAAGTCGCC 1627355 ||||||||| ||| | | || | ||||| || ||||||| || || || || Sbjct 38837 CCACAGGCCACGCTCAACCAAGTCCTTGAGCAACCATGGGTTGACAACTTGGAACTCACC 38896 Query 1627356 CGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTG-ATGACCTCGCACGCCTCGGTGTTGC 1627414 | |||||| || || | |||||||||| ||||| ||| | ||| | |||| || || Sbjct 38897 AGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGGC-TCGAAGCACTCGTTGAAGC 38955 Query 1627415 CCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTTGCGCAGGC 1627474 ||| ||||||||| || | || || |||||| | || ||||| ||||||||||| | | Sbjct 38956 CCATGATCTGCGAGGTGGAAGCAGTTGGCATGGGAGCGACGAGAAGCGAGTTGCGGACAC 39015 Query 1627475 CGTGCT-GTCGAACTAGCGCGCGCAGCGCGTCCCAGTCCCAG 1627515 | |||| | ||| || | || || ||| ||||||||||| Sbjct 39016 CATGCTCGGCGATCTTG-GCCTTGAGTGCGGCCCAGTCCCAG 39056 Score = 86.0 bits (94), Expect = 8e-11 Identities = 216/327 (66%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 |||||||||| ||||| |||||||| ||||||| |||||| ||||||| ||||| Sbjct 27415 GTCACCACCTACGGCGAATCGCACGGCAAAAGCGTCGGATGCATCGTCGACGGTGTGCCC 27474 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 ||| || | || | || || || ||||| || || || ||||| || || Sbjct 27475 CCGGGCCTCGAGCTCACGGAAGCTGATATCCAACCCTCCATGACCCGCCGCCGCCCTGGA 27534 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| ||||||| | || || ||| ||||| ||| || ||||||||||| || Sbjct 27535 CAGAGCGCACTCACGACACCTCGCGACGAGAAAGATATGGTGGAAATCCAGTCGGGTACA 27594 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 ||| | || | || | || || ||||| | | | || |||| ||||||||| Sbjct 27595 GAGCATGGAATTACATTGGGATCACCCGTGGCCATGAGGGTCATGAACCAAGACCAGCGG 27654 Query 18328 CCCGTCGACT-----ATTCCGAC-ATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTAC 18381 || |||| | |||| ||| || | || || ||| ||||| |||| Sbjct 27655 CCGAAAGACTACGGAAGCTCGACAATGGACATGTACCCTCGTCCCAGTCACGCGGACTGG 27714 Query 18382 ACCTACATGGCCAAGTACGGCATCAAG 18408 || ||| ||| ||||||||| ||||| Sbjct 27715 ACATACTTGGAGAAGTACGGCGTCAAG 27741 >seq3045 Length=120461 Score = 123 bits (136), Expect = 3e-22 Identities = 131/170 (77%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 1592132 TGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGC 1592190 |||||| || |||| ||| | || || ||| | || || ||| | |||||||| || Sbjct 60046 TGGGACCAGAAGTTCATGC-AGGTGGACCAGGAGATGCTGTTCGAGATCATCCTCGCTGC 60104 Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 |||||| | ||||||||| | || ||||| | || |||||| | || || |||||||| Sbjct 60105 GAACTACATGGACATCAAGGCGCTCCTCGACGTCGGCTGCAAGACCGTCGCAAACATGAT 60164 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||| || ||||||||||||||||| || ||||| || ||| Sbjct 60165 CAAGGGCAAGTCACCAGAGGAGATCCGCAAGACGTTCAACATTCAGAACG 60214 >seq2411 Length=234945 Score = 114 bits (126), Expect = 2e-19 Identities = 154/210 (73%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | ||| || || |||| ||||||||| ||||||| | || Sbjct 38573 GCTTGGCCAGCTCACCCGGGAGGATGAGTCGGACGGAGGTCTGGATTTCGCGCGAGGAGA 38632 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGAC--GGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 ||||| |||||| | |||| || | || || ||||||| ||| ||| |||| Sbjct 38633 TCGTGGACTTCTTGTTGTA-TGCGGCAAGCTTGGACG-CCTCGGTTGCGACGCGCTCGAA 38690 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 ||||||||||| || ||||||| || ||||| | ||||||||| || |||||| Sbjct 38691 GATGTCGTTGACGAAGGAGTTCAGGATGGACATGGCGCGGTTGGAGATACCAGTGTCGGG 38750 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATGAA 1254550 ||| ||||||||||| || || ||| ||| Sbjct 38751 GTGGACCTGCTTGAGGAC--TGGAGACGAA 38778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106861821371460