Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2317 113 4e-20 >seq2317 Length=245020 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || ||||| || |||||||| || | | Sbjct 71428 ATGCAAATCTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAGTCATCA 71369 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||||||||| || || || || || || ||| Sbjct 71368 GACACAATCGACAACGTGAAGTCGAAGATCCAAGACAAGGAGGGTATCCCACCGGACCAA 71309 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| ||||| ||| | || || || ||| Sbjct 71308 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGAACGCTTTCTGACTACAAC 71249 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || ||||||||| | || |||| ||||| Sbjct 71248 ATTCAGAAGGAGAGCACCCTGCACTTGGTGCTCCGTCTGCGTGGAGG 71202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449878591826400