Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq682 156 3e-33 >seq682 Length=32212 Score = 156 bits (172), Expect = 3e-33 Identities = 223/314 (71%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 34309 ACGATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAA 34368 ||| ||| | ||||||| ||||| | || ||| || | ||| |||||| |||||| Sbjct 28882 ACGCTGACCACAGTCTCAGGGTTCTTGCACTCCTTGCATAGCACGAACTTGTTGATGAAG 28941 Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 ||||| || |||||| | ||| | ||||| | |||||||| ||| | || || Sbjct 28942 CCATCCAGGTAGTCCTGAAGCTTGCTTGCTTCGTGAGCGCCGTTGATGATCCAGCGGTCA 29001 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA 34488 | ||| ||||| | || || || ||||| ||| | || |||||||| || ||| Sbjct 29002 TCCTTGGGATCGATGTTTGTCTGAGCACCCAGTTCGAAGCCAAAGTACTTGATCACGTAG 29061 Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATG 34548 | | || || | ||| || |||| | | || |||||||||||| ||||||||| Sbjct 29062 TTTGGTGGGCGGGCGAGCTGCTGAGCGACGTTGCTCAGGTTGACGATGACGGTCTTGATG 29121 Query 34549 CCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCG 34608 ||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| | | Sbjct 29122 CCGTTACCCTTTCCTTCGACCTTGGACTGGATGCGCTCCATCTTGTATCGGTAGAAAGGG 29181 Query 34609 TCCGCCACATTGCG 34622 ||| |||| ||| Sbjct 29182 TCCTGGACATCGCG 29195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412824593506340