Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2411 178 2e-38
seq3272 149 1e-29
seq3045 123 4e-22
seq2546 116 6e-20
>seq2411
Length=234945
Score = 178 bits (196), Expect = 2e-38
Identities = 183/236 (78%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| |||||||||||| ||||||| || || | |
Sbjct 38535 GTACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCCGGGAG 38594
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| || || |||| ||||||||| ||||| | | ||||||| |||||| || |
Sbjct 38595 GATGAGTCGGACGGAGGTCTGGATTTCGCGCGAGGAGATCGTGGACTTCTTGTT-GTATG 38653
Query 1485591 CGCCAGGC--GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|| || || || | |||||||| ||| ||| |||| ||||||||||| || ||||||
Sbjct 38654 CGGCAAGCTTGGAC-GCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAGGAGTTC 38712
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
| ||| ||||| | ||||||||| || ||||||||| ||||||||||| ||
Sbjct 38713 AGGATGGACATGGCGCGGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 38768
>seq3272
Length=75414
Score = 149 bits (164), Expect = 1e-29
Identities = 212/295 (72%), Gaps = 9/295 (3%)
Strand=Plus/Plus
Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAA 794435
|||||| |||||||| || |||||||| | ||| ||||| | |||| || |||||
Sbjct 16531 GAGGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATCGACGCGAAAGATCCGGAGAA 16590
Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495
|||||||| |||| |||||||||| ||| ||| || |||||| ||| | ||
Sbjct 16591 GAAGATGCCTTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTGGA---GTTCTT 16647
Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555
| | |||||| || |||||| || ||||| || | | | || | |||||||
Sbjct 16648 GTCGGAGATCCATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGAT 16707
Query 794556 GGCGCGAAAGAGGTG-GTCCTT--CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612
|||| ||||||| || | | || | || || ||| ||| ||||||||||||||
Sbjct 16708 GGCGTTGAAGAGGTACGTGCGTTGCTTG---GGCTCGCTGATGTATGTGTCGATGAGGAG 16764
Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
||||| ||||| ||||||||||| || || |||||||||||| || ||||||
Sbjct 16765 GGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAG 16819
Score = 147 bits (162), Expect = 3e-29
Identities = 223/315 (71%), Gaps = 2/315 (1%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| ||||| |||||||| |||
Sbjct 16173 TGACACCGGCCTTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTCGTCTTGCCTCCGA 16232
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||||| | ||||||||||| | ||||
Sbjct 16233 GAGAGATGTTCTCCATGAAATCGAAGGGGTTGGTGGCGTTGTAGTGCTTCTGGTTGCCGA 16292
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | || || || ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct 16293 GTGCCAGGAGGAGACGATCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCA 16352
Query 794071 TGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
| |||| |||||| || ||| || | || ||| ||||| | |||||| |||| |||
Sbjct 16353 TTCCGAGGAGCGCACATGGG-AGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCC 16411
Query 794130 TCGATGATGATCTGCCTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGC 794189
||| ||||||| | ||| | | || ||||||| | ||| | | | |||
Sbjct 16412 TCGGTGATGATGTCTTCAACCACTTGGTTTGATGGCTTGTTGTTGAGATGAGAGAACAGC 16471
Query 794190 AGGCAGGCAAAGTCG 794204
|||||||||||||||
Sbjct 16472 AGGCAGGCAAAGTCG 16486
Score = 114 bits (126), Expect = 2e-19
Identities = 160/224 (71%), Gaps = 3/224 (1%)
Strand=Plus/Plus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
|| || | ||||||||| | ||| || || ||||||| || ||||||||
Sbjct 16814 AAGCAGCGGGCCTCGGGGATTTGCACTTCTCCGCTGAAGCGCTCGATGAGGTTCTCGTTG 16873
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260
|||||||| || || ||||| ||||| |||||||| ||| ||| |||||||||
Sbjct 16874 ACGATGCCATCCGAAGCAGCGAAGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCG 16933
Query 796261 TCGCTGAG---CGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317
||| | || | | ||||| | ||| | ||| |||| ||||||||| |||
Sbjct 16934 TCGTTCAGGCGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCGATCTCCTCGGCAGTC 16993
Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTG 796361
|||||||||||||||||||| |||||||| | ||| ||| ||||
Sbjct 16994 CAAAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGATCTGTTG 17037
>seq3045
Length=120461
Score = 123 bits (136), Expect = 4e-22
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
|| || ||| | |||||||| || |||||| | ||||||||| | |||||||| | ||
Sbjct 60082 CTGTTCGAGATCATCCTCGCTGCGAACTACATGGACATCAAGGCGCTCCTCGACGTCGGC 60141
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
||||||||||| || ||| | |||||||||||||| || ||||| ||||||||||| ||
Sbjct 60142 TGCAAGACCGTCGCAAACATGATCAAGGGCAAGTCACCAGAGGAGATCCGCAAGACGTTC 60201
Query 2035749 AACATCAAGTACG 2035761
||||| || |||
Sbjct 60202 AACATTCAGAACG 60214
>seq2546
Length=134672
Score = 116 bits (128), Expect = 6e-20
Identities = 186/267 (70%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596
|| ||||||||| ||||| || |||| |||||| || || |||||||| || || |||||
Sbjct 39926 GCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTT 39985
Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656
||| ||||||||||| | ||| || || | ||||| | |||| || |
Sbjct 39986 GGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGCGCGAATTCTGTGGACGTTGAG 40045
Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716
|| ||||| ||||| ||| ||||| | ||||| | ||||| || |||||||| ||
Sbjct 40046 CCCAATGCCTCCGGCGTTCTTAGAGATCATGGCGCAGGTCTTCAGTGTGTCGTAGATCCC 40105
Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776
|| || ||| |||||||||| | || ||||| || | || | | | ||
Sbjct 40106 ATCAATACTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGGGTGT 40165
Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGC 2073803
|| ||| |||| |||||||||| |||
Sbjct 40166 TCCAGCACTGAACAGCGTGGGCGACGC 40192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915886853983820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |