Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq2704 87.8 7e-12 >seq2704 Length=262699 Score = 87.8 bits (96), Expect = 7e-12 Identities = 134/187 (72%), Gaps = 7/187 (4%) Strand=Plus/Minus Query 309661 GCTCCAACCTTCGATGCGACAATCTCCATCAACTTGGCGATAGTCATACGAGAAGGAATG 309720 || || ||||| || || | ||| ||||| | |||||| |||||||| || |||||| Sbjct 27686 GCGCCGACCTTGGAGAGGAGACACTCGATCAAATGGGCGATTGTCATACGGGAGGGAATG 27627 Query 309721 GCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTGAT-TGGGTTGAAAGGCATATC 309779 || |||||||||||| ||||| ||| | | || || || | ||||||||| || Sbjct 27626 GCGTGAGGGTTGATGATGATGTCGGGTGTGAGACC----ATCTGCGGAGAAAGGCATGTC 27571 Query 309780 TTCTT-CAGGTACAATCAAACCAATAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGT 309838 ||||| |||| | | ||| || || |||||||| |||| | || || ||||||| Sbjct 27570 TTCTTGGCGGTA-GGTGATACCGATGGTACCCTTTTGTCCGTGACGAGAGGCGAACTTGT 27512 Query 309839 CACCAAT 309845 | || || Sbjct 27511 CTCCGAT 27505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951889867308640