Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2317 95.1 9e-15 >seq2317 Length=245020 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | |||||||||||| || || |||||||| || || | | ||||| Sbjct 71442 CGGAGGACGAGATGAAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCG 71501 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || ||||| ||||| || | ||||||| || || || || ||||| ||||| ||| Sbjct 71502 TCCTCAAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTG 71561 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || |||||| | || | ||||| || || || || | || || Sbjct 71562 TCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATC 71621 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||| || || || |||||||| Sbjct 71622 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 71656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385203331376580