Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2546 250 2e-61 seq3272 141 9e-29 seq2317 104 2e-17 seq2215 82.4 7e-11 >seq2546 Length=134672 Score = 250 bits (276), Expect = 2e-61 Identities = 946/1463 (65%), Gaps = 35/1463 (2%) Strand=Plus/Plus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCT 148119 ||| || ||||| || ||||||||||||| ||||| | || || || | || |||| Sbjct 38678 CTGATCGATGAAAGCACCACGGTCAGCGGACATTTGGACGATGTGGCGCTGGCTG-ATCT 38736 Query 148120 CCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCG 148179 ||||| | ||||| ||||| ||||| | ||||||||| | || ||||| | | Sbjct 38737 CCCAGACGGTCTTATACAGAGCCTTGAGGTCGTCGGGAATGTTGGGAATTCGCTGGATGG 38796 Query 148180 AGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239 | || | | || | || | || ||| | ||| | | ||| |||| | || Sbjct 38797 AACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGACCACAGGCCACGCTCAACCA 38856 Query 148240 GGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGAT 148299 ||| | || || | | || || || || ||||| || |||||||| || || | Sbjct 38857 AGTCCTTGAGCAACCATGGGTTGACAACTTGGAACTCACCAGCGAGCACACGACGGGAGT 38916 Query 148300 ACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTG 148359 | | |||||| || | || || || |||||||| ||||| ||||||| ||| | | Sbjct 38917 AGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGAGGTGGAAG 38976 Query 148360 CCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCT 148419 | || |||||| || || || ||||||||||| | ||| | | || ||| || Sbjct 38977 CAGTTGGCATGGGAGCGACGAGAAGCGAGTTGCGGACACCATGCTCGGCGATCTTGGCCT 39036 Query 148420 TCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAA 148479 | || || |||||||||||||| | || ||||| |||||||||||| || || Sbjct 39037 TGAGTGCGGCCCAGTCCCAGAGATCAGTAGGAGTCACACCCCACATGTCGTATTGAAGCT 39096 Query 148480 TGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTT 148539 ||| | |||| ||||||||| | ||| ||||| || || || || | Sbjct 39097 CGCCCTTGGAGACGGGAGAGCCCTCGTATGTCTCGTATGGTCCAAGCTTGGCAGCGAGAT 39156 Query 148540 CGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC---A 148596 |||| || ||| || ||| ||| || |||||| || || |||||||| Sbjct 39157 CGCATGAAGCGGTGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTGAC 39216 Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656 | ||| | | | ||| | ||||| || || || || || |||||||| || | Sbjct 39217 GGGCCTCAGGAGAG---TCGAAAGGCATGCGAAGAGCCAAGAAAGCATCGGCAAGACCAT 39273 Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGA 148715 || || | || ||||| || || | |||| ||| || |||| | | || Sbjct 39274 TGACACCGAGACCGATGGGACGATGACGGAAGTTGCTCTTGCGAGC-CTCTGGCACTGGG 39332 Query 148716 TAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGTAATTCTGCG 148774 ||||||||| |||||||||||| ||||| || || || ||| | | | Sbjct 39333 TAGTGGTTGACCTCGATGATCTTGTTCAAG-TTCTTGGTGACGGTCTGTGTGACCTGGTG 39391 Query 148775 CAGCAATTCAAAATCGTA---CTTGTCATCTACGATG----CATCGGT--TCACGGCGAT 148825 ||| |||||| ||| | || || ||| ||||| ||| ||| | |||| Sbjct 39392 AAGCTTTTCAAAGTCGAAGCGCTCGT--TCT-CGATGTCGACATAGGTGGGAAGAGCGAG 39448 Query 148826 AGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCA 148885 ||| || || ||||||||||| |||||| || || ||||||| | |||||||| ||| Sbjct 39449 AGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGTGCA 39508 Query 148886 CAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTC 148945 || ||| || ||| |||| ||||| || |||||||||| |||| ||||| Sbjct 39509 GAGGTTGGAGCTGCGGATGGTTCCCAAATTCTTCTGGTTGCTCTTGCCGTTGGCAGCGTC 39568 Query 148946 CTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGC 149003 |||||| || || || || ||| || || || | || | ||| | | | Sbjct 39569 CTTGTAAAGGATATATGGCGTGCCGGTCTCGGTTTGAGCCTCGAGGATGGCATACCA--G 39626 Query 149004 AGGTCCTGCGCGCGCACTTGCTGCTCGTAGC-GACCCTCCTGCTCGTATAAAGTATACAG 149062 || | ||| ||||| || || | || | ||||| |||||||| ||||| Sbjct 39627 AGCTTCTGAGCGCGGACGGTCT-CACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAG 39685 Query 149063 CCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAG 149122 | ||||||| | |||||||| ||| | ||||||||||||| ||| |||||||| | Sbjct 39686 CTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCACATCAA 39745 Query 149123 CGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTA 149182 | ||| | | | || |||||||| || ||||| || ||||| || |||| Sbjct 39746 AGTCCAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGATCTGGGACCCACAGACCGTA 39805 Query 149183 CATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCT 149242 | || ||||| || || || || ||| ||| || | | | | Sbjct 39806 GAACAGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGA 39865 Query 149243 GAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCC 149299 ||| | || |||||||| ||||| ||||||| || | ||||| ||| ||||| Sbjct 39866 GAAGACATCTGCGTGCCATGGCTCGATGTACATGGCAAAGGCGCCAGGTCGCTTATTGCC 39925 Query 149300 GCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACT 149359 |||||||||||||| ||| | ||||||||||||| || | ||| ||| | | || | Sbjct 39926 GCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTT 39985 Query 149360 GGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGAC 149419 || || ||||| || ||| ||| ||| || || | | |||| ||||||| Sbjct 39986 GGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGCGCGAATTCTGTGGACGTTGAG 40045 Query 149420 GCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAGATGC 149478 || ||||| ||| ||| ||| ||||| ||||| ||| | || || |||||| | Sbjct 40046 CCCAATGCCTCCGGCGTTCTTAGAGATCATGGCGCAGGTCTTC-AGTGTGTCGTAGATCC 40104 Query 149479 CCTCGATGCTGTCGCGCTTCATG 149501 | || || ||||| ||||||| Sbjct 40105 CATCAATACTGTCATCCTTCATG 40127 >seq3272 Length=75414 Score = 141 bits (156), Expect = 9e-29 Identities = 349/520 (67%), Gaps = 17/520 (3%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| | ||| Sbjct 16189 GTAGTCACCGACACGCTTCTCGAAGAAGTTCGTCTTGCCTCCGAGAGAGATGTTCTCCAT 16248 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 || ||||| |||||| | ||||| ||| ||| | | ||| | | ||| || || Sbjct 16249 GAAATCGAAGGGGTTGGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAGGAGGAGACG 16308 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533 || || || ||||| ||||| | ||||||| || |||||||| || || | ||| || Sbjct 16309 ATCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGC-AC 16367 Query 120534 CGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCG- 120591 | | | || | |||| ||||||| ||| ||| | || ||||| ||| ||| | Sbjct 16368 ATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATGATGTCTT 16427 Query 120592 --AGCA--TAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 | || | || || ||| | |||| | |||| | | | | |||||| || Sbjct 16428 CAACCACTTGGTTTGAT--GGCTTGTTGT-TGAGATGAGAGAACAG-----CAGGCAGGC 16479 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 |||||| ||||||| |||||| || || || || ||||||||| || || ||||| || Sbjct 16480 AAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAAGTGAGGCCAGG 16539 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGC-AAAGCTGCCCGAAAAGAACACGC 120766 ||||| || | |||| | |||| || | || |||| | || || ||||| | || Sbjct 16540 CATGAGACCACGCTTCTTCAACCAGAAGATCGACGCGAAAGAT-CCGGAGAAGAAGATGC 16598 Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCC 120826 | || | | ||||||||||| | || ||| || || | ||||| | ||||| Sbjct 16599 CTTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTGGAGTTCTTGTCGGAGATCC 16658 Query 120827 ACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 | || ||||| || ||||| || || | ||| || || Sbjct 16659 ATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGAT 16698 >seq2317 Length=245020 Score = 104 bits (114), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512 || || | |||| ||| ||||| || ||||| || | ||| || || ||||| | Sbjct 71223 AAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGCGTTCGGCCG--TCCTCAA 71280 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| ||| | ||||| ||||| ||||| || ||||| || |||||||| || Sbjct 71281 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGTGGGATACCCTCCTTGTCTTGGA 71340 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | || | ||||| | | |||||| |||| |||| || |||| Sbjct 71341 TCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTCCACTTCGAGTGTGATAGTCTTGC 71400 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || ||||| || ||||| Sbjct 71401 CGGTGAGTGTCTTGACGAAGATTTGCAT 71428 Score = 100 bits (110), Expect = 3e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| |||| | ||| | ||||| || |||||||| Sbjct 71688 GTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGCCCATCCTCAAGTTGCTTGCCG 71747 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 71748 GCGAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTC 71807 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | || | || || | || ||| || || | ||||| ||| || || |||| Sbjct 71808 ACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTGATGGTCTTTCCAGTCA 71862 >seq2215 Length=151005 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/118 (76%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512 || || | ||| ||||| ||||| || ||||| ||| | || || || ||||||| Sbjct 66723 AAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCG--TCCTCGA 66780 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570 |||||||||| ||| | || || ||||| ||||| || || |||||||||||||| || Sbjct 66781 GCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGTGGAATGCCTTCCTTGTCTGT 66838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483400375471200