Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq2317 98.7 7e-16
>seq2317
Length=245020
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605
||| || ||| ||| || || |||||||| |||||||| ||||| |||| || | |||
Sbjct 71453 ATGAAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCAAGTTG 71512
Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665
|| ||||| || ||||| ||||| || ||| | || | || || ||||| || ||
Sbjct 71513 CTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 71572
Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724
| || | ||| ||| | |||||| || ||||| || | |||||||| || || |
Sbjct 71573 CGACTTGA-CATTGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCAG 71631
Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750
| | || || || ||||||||||||
Sbjct 71632 TGAGGGTCTTGACGAAGATCTGCATA 71657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328690459449600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |