Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq3272 96.9 3e-15
>seq3272
Length=75414
Score = 96.9 bits (106), Expect = 3e-15
Identities = 131/182 (72%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771
||||||||| || | ||| |||||| | || | |||||||| ||||| || |||||
Sbjct 16854 GCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGCGAAGAAGGCCAGGACGTGGG 16913
Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831
| ||||| || || | ||||||||| ||||||||||| | || ||||||||| |
Sbjct 16914 AGATGAAGAAGCGCTCGTCGTCGTTCAGGCGCTTGTTCCAGTCGTGAAGGTCCTTGGAGA 16973
Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891
|||||||| ||| | |||| | | | |||||||||||| ||||| ||||
Sbjct 16974 GATCGATCTCCTCGGCAGTCCAAAAGGAGGCCTCGGCCTTCTTGTACATTTGCC--AGAT 17031
Query 110892 CT 110893
||
Sbjct 17032 CT 17033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445075594761600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |