Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3272 96.9 3e-15 >seq3272 Length=75414 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 ||||||||| || | ||| |||||| | || | |||||||| ||||| || ||||| Sbjct 16854 GCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGCGAAGAAGGCCAGGACGTGGG 16913 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | ||||||||| ||||||||||| | || ||||||||| | Sbjct 16914 AGATGAAGAAGCGCTCGTCGTCGTTCAGGCGCTTGTTCCAGTCGTGAAGGTCCTTGGAGA 16973 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 |||||||| ||| | |||| | | | |||||||||||| ||||| |||| Sbjct 16974 GATCGATCTCCTCGGCAGTCCAAAAGGAGGCCTCGGCCTTCTTGTACATTTGCC--AGAT 17031 Query 110892 CT 110893 || Sbjct 17032 CT 17033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445075594761600