Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2546 116 4e-21
seq2317 107 2e-18
seq864 86.0 6e-12
>seq2546
Length=134672
Score = 116 bits (128), Expect = 4e-21
Identities = 568/892 (64%), Gaps = 25/892 (3%)
Strand=Plus/Minus
Query 7525 TACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTG 7584
||| | |||| ||||| ||| | || ||| || ||||| ||| | |||| |||
Sbjct 40330 TACCTTTTGAGGATCAATGGCAAGGTTGCCGAAAGACCACAACAGATGATCATGCGTGTG 40271
Query 7585 GCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCT 7644
|| ||||| || |||||||| |||||||| | ||| | || || ||| | |||||
Sbjct 40270 GCTGTGGGAATCCACGGCGAGGACATTGAGTCTGCCATTGAGACCTACAACTACATGTCG 40211
Query 7645 TTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACA---AACGCGCCT 7701
|| | || || || || |||||||| |||| || || ||| ||||| |
Sbjct 40210 AACAAGTACTTCACACATGCGTCGCCCACGCTGTTCAGTGCTGGAACACCCAACGC---T 40154
Query 7702 CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAAC 7761
|| || | || || || | | |||| || ||||| || || || || ||| ||
Sbjct 40153 CAGCTGGCATCCTGCTTCCTCATCGACATGAAGGATGACAGTATTGATGGGATCTACGAC 40094
Query 7762 ACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAAC 7821
|| ||| ||||||| || || || ||| ||| || || || || ||||| ||
Sbjct 40093 ACACTGAAGACCTGCGCCATGATCTCTAAGAACGCCGGAGGCATTGGGCTCAACGTCCAC 40034
Query 7822 GACGTGCGCGCCAACGGTAGCCG-CATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGA 7880
| ||||| | ||| ||| |||| ||||||||||| | ||| |||| | |
Sbjct 40033 AGAATTCGCGCAACCGG-AGCATACATCAGCGGCACCAACGGAACATCCAACGGTCTCGT 39975
Query 7881 GCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCG 7937
|||||| |||| ||||| || ||| | | || | || |||||||| || |||||
Sbjct 39974 ACCCATGCTGCGTGTGTTTAACAACACCGCTCGCTACGTCGACCAGGGCGGCAATAAGCG 39915
Query 7938 CAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAA 7997
|||||| |||||| || | ||||| |||||||| || | | | | | | |
Sbjct 39914 ACCTGGCGCCTTTGCCATGTACATCGAGCCATGGCACGCAGATGTCTTCTCCTTCTTGGA 39855
Query 7998 TCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTG 8057
||| || ||| || || || || |||||||| |||| ||| ||||
Sbjct 39854 TCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGCTCGCGATCTGTTCTACGGTCTGTG 39795
Query 8058 GGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAA--TGGTCGCTCATGTGC 8115
||| || ||||| || |||| ||| ||| | | | || | ||| | | ||||||
Sbjct 39794 GGTCCCAGATCTCTTCATGAAGCGTGTTGA--GCAAAATACCACCTGGACTTTGATGTGC 39737
Query 8116 CCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAA 8175
|| | ||||| | | || ||||| | | || || | ||||| |
Sbjct 39736 CCTCACGAGTGCCCCGGTCTGGCTGATGTCTACGGCGCTGAGTTCGAGGAGCTGTACGAG 39677
Query 8176 CAATACGAACACGACGGC--GCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCG-- 8231
| |||||| | || ||| | || |||| | | | |||| | | || | |
Sbjct 39676 CGATACGAGCGTGAGGGCAAGGGT-CGTGAG---ACCGTCCGCGCTC-AGAAGCTCTGGT 39622
Query 8232 -CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTT 8290
||||| |||| ||||| ||| ||||| | ||| || || || ||||| ||||||
Sbjct 39621 ATGCCATCCTCGAGGCTCAAACCGAGACCGGCACGCCATATATCCTTTACAAGGACGCTG 39562
Query 8291 GCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTG 8350
||||| ||| ||||| || | || |||| ||||| | || ||| || ||| | |
Sbjct 39561 CCAACGGCAAGAGCAACCAGAAGAATTTGGGAACCATCCGCAGCTCCAACCTCTGCACCG 39502
Query 8351 AAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402
| || | |||||| || || || || || ||||| ||||| || || ||
Sbjct 39501 AGATCATCGAGTACACTGCTCCTGATGAGGTCGCCGTGTGCAACCTTGCATC 39450
>seq2317
Length=245020
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || |||||||| ||||| ||||||||||||||| | ||| | ||| ||
Sbjct 71448 ACGAGATGAAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCA 71507
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|| || ||||| || || ||||| ||||| || || || || ||||| || || || ||
Sbjct 71508 AGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 71567
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | ||||| ||||| ||||| || | || || || ||
Sbjct 71568 ATCTTCGACTTGACATTGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTG 71627
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || ||||| || |||||
Sbjct 71628 CCAGTGAGGGTCTTGACGAAGATCTGCAT 71656
Score = 102 bits (112), Expect = 8e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542
|| |||||| | || || | ||| | ||| || ||| ||||| ||||||||||||||
Sbjct 71198 CTGTCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTC 71257
Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602
|| || | ||| || ||||| ||||| || || || | ||||| || || ||
Sbjct 71258 AGAAAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGG 71317
Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|| || || || || ||||| || || || || ||| | |||||| || || ||
Sbjct 71318 TGGGATACCCTCCTTGTCTTGGATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTC 71377
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||| ||||| || || || || ||||| | || || ||||| ||||||||
Sbjct 71378 CACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 71428
>seq864
Length=88037
Score = 86.0 bits (94), Expect = 6e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||||| | || | || ||||| || || || || || |
Sbjct 47486 CCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAGA 47545
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
|||| ||||| || || || || || || || || || ||||| || ||||| ||
Sbjct 47546 TCAATCGCTGTTGGTCCGGTGGGATTCCCTCCTTATCCTGAATCTTGCTCTTGACGTTGT 47605
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||||||||| ||||| ||||| || || || || || || | || || ||||
Sbjct 47606 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGA 47665
Query 134704 AA 134705
||
Sbjct 47666 AA 47667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505377046917600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |