Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2546 196 6e-45
seq3272 174 2e-38
>seq2546
Length=134672
Score = 196 bits (216), Expect = 6e-45
Identities = 950/1488 (64%), Gaps = 31/1488 (2%)
Strand=Plus/Plus
Query 118143 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 118202
|||||||| |||||||| ||||| || | ||||| ||| | |||||||||
Sbjct 38877 TTGACAACTTGGAACTCACCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGGC 38936
Query 118203 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 118262
|| |||||||| ||| |||| ||| || | ||||| || || |||||||| || | |
Sbjct 38937 TCGAAGCACTCGTTGAAGCCCATGATCTGCGAGGTGGAAGCAGTTGGCATGGGAGCGACG 38996
Query 118263 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAG 118322
||||| ||| |||| ||| | || || ||||||| ||| ||||||| ||
Sbjct 38997 AGAAGCGAGTTGCGGACACCATGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCCAG 39056
Query 118323 TTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGG 118378
|| | | ||| | ||| ||||| || | || || || | ||| | ||
Sbjct 39057 A-GATCAGTAGGAGTCACACCC---CACATGTCGTATTGAAGCTCGCCCTTGGAGACGGG 39112
Query 118379 CGATCCCTCAAATGTCTCATATGGGCCCTCAACCT---CCGCCAATTCGGAGCTCGCCTC 118435
|| ||||| ||||||| ||||| || || || | || | ||| | ||
Sbjct 39113 AGAGCCCTCGTATGTCTCGTATGGTCC---AAGCTTGGCAGCGAGATCGCATGAAGCGGT 39169
Query 118436 GAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGG 118494
||| || ||||| || || || || || || || || | || | |||||| |
Sbjct 39170 GAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTGACG-GGCCTCAGGAG 39228
Query 118495 AATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 118553
| || || | | || | || ||| |||| || ||||| | ||||||||| ||
Sbjct 39229 AGTCGAAAGGCATGCGAAGAGCCAAGAAAG-CATCGGCAAGACCATTGACACCGAGACCG 39287
Query 118554 ATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC-CACGGGATAAAAATTCCTATC 118612
|| || ||||| | | || ||| ||||| ||| ||| || || || ||
Sbjct 39288 ATGGGACGATGACGGAAGTTGCTCTTGCGAGCC-TCTGGCACTGGGTAGTGGTTGACCTC 39346
Query 118613 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 118672
||| | | | || | || |||||||| || ||||| | ||||||||||| | ||
Sbjct 39347 GATGATCTTGTTCAAGTTCTTGGTGACGGTCTGTGTGACCTGGTGAAGCTTTTCAAAGTC 39406
Query 118673 AAAACTGCGAGT-CTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACA 118731
|| | || || ||| | |||||| | ||||| |||| || || || || ||||
Sbjct 39407 GAAGC-GCTCGTTCTCGATGTCGACATAGGTGGGAAGAGCGAGAGATGCAAGGTTGCACA 39465
Query 118732 CAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAA 118791
| | | |||||| | |||||||||| || || || ||||| | ||| || || |
Sbjct 39466 CGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGA 39525
Query 118792 TGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATG 118851
|||| ||||| ||||| || || ||| ||| || ||||||||||| || ||||
Sbjct 39526 TGGTTCCCAAATTCTTCTGGTTGCTCTTGCCGTTGGCAGCGTCCTTGTAAAGGATATATG 39585
Query 118852 GCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACA 118910
|||| || ||||| ||||| | || ||| || || | ||||| | || | ||| | ||
Sbjct 39586 GCGTGCCGGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTG-AGCGCGGACG 39644
Query 118911 GTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCC 118970
|| | | ||||| |||||| ||| || | || ||||| | ||
Sbjct 39645 GTCTCACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCG 39704
Query 118971 ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCC 119030
| | || | || || || || | ||||| | | || ||| | | |
Sbjct 39705 TAGACATCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGC 39764
Query 119031 TCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGA 119090
||||| |||||||||||||| ||||||| ||| || | |||| ||||| ||| |||
Sbjct 39765 TCAACACGCTTCATGAAGAGATCTGGGACCCACAGACCGTAGAACAGATCGCGAGCACGA 39824
Query 119091 GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCAC 119150
| || || | || || || || | ||||| ||| | || ||| ||||||||
Sbjct 39825 ACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCAT 39884
Query 119151 GGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTC 119207
|| || | ||||| || | | || || | || |||||| || || |
Sbjct 39885 GGCTCGATGTACATGGCAAAGGCGCCAGGTCGCTTATTGCCGCCCTGGTCGACGTAGCGA 39944
Query 119208 GCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC 119267
|| ||| |||||| ||||| ||||| || | || ||| | |||| || || || ||
Sbjct 39945 GCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCG 40004
Query 119268 CGAATACGAGACTTATTGGCTCTGACATC-GTGGATGTGCATACCAATACCCCCTGCCCA 119326
| || | | || | || || ||||| || | ||||| || || ||
Sbjct 40005 CTGATGTATGCTCCGGTTGCGC-GAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTT 40063
Query 119327 CTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTT 119386
||| ||||| ||||| | | || || ||||||||||||| || |||| ||||
Sbjct 40064 CTTAGAGATCATGGCGCAGGTCTTCAGTGTGTCGTAGATCCCATCAATACTGTCATCCTT 40123
Query 119387 ATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGT 119446
| |||||||||||||| | || |||| ||||||| ||||| |||| || ||
Sbjct 40124 CATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGGGTGTTCCAGCACTGAACAGCGT 40183
Query 119447 TGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGG 119505
|| | ||| || |||| ||| | | ||||| | || ||||||||| | | | |
Sbjct 40184 GGGCGACGCATGTGTGAA-GTACTTGTTCGACATGTAGTTGTAGGTCTCAATGGCAGACT 40242
Query 119506 GAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCA 119565
|||||| || ||||| || || | | || ||||| | ||| | ||| ||| ||||
Sbjct 40243 CAATGTCCTCGCCGTGGATTCCCACAGCCACACGCATGATCATCTGTTGTGGTCTTTCGG 40302
Query 119566 TCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 119613
| | |||| || |||| ||||| | |||||| |||||||
Sbjct 40303 CAACCTTGCCATTGATCCTCAAAAGGTATGACCTCTCCAGCGTCTTGA 40350
>seq3272
Length=75414
Score = 174 bits (192), Expect = 2e-38
Identities = 545/821 (66%), Gaps = 31/821 (4%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786
||||| || || ||||||||||||||||| ||||| || ||| || ||| ||||||||
Sbjct 16190 TAGTCACCGACACGCTTCTCGAAGAAGTTCGTCTTGCC-TCCGAGAGAGATGTTCTCCAT 16248
Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAAT--CTGTTTGAGGAG 129843
||||| || ||||| | | ||| | | |||| | | | | | ||||||
Sbjct 16249 GAAATCGAAGGGGTTGGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAG---GAGGAG 16305
Query 129844 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTT 129903
|||||| | |||| |||| ||||| | |||| || || |||||| |||| |||
Sbjct 16306 ACGATCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGC 16365
Query 129904 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGC 129963
||||||||| ||||| || |||| ||| ||| ||| | ||||| || | |||| |
Sbjct 16366 ACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATGATGTC 16425
Query 129964 GTGAA-----TGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018
| || |||| | || | || | ||| | || ||| || ||||
Sbjct 16426 TTCAACCACTTGGTTTGA-TGGCTTGT-TGTTGAGATGAGA---GAACAGCAGGCAGGCA 16480
Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078
|| || ||| | ||||| |||||||| ||||| || || ||||| || || |||
Sbjct 16481 AAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAAGTGAGGCCAGGC 16540
Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGATCCC 130137
|||||||| ||||||||||||||||| |||| | | ||| || || ||||||||||| ||
Sbjct 16541 ATGAGACCACGCTTCTTCAACCAGAAGATCGACGCGAAA-GATCCGGAGAAGAAGATGCC 16599
Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACC 130196
|| | || || || | |||||| ||||||| | | | |||| | | ||
Sbjct 16600 TTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTG-GAGTTCTTGTCGGAGATCC 16658
Query 130197 ACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA 130256
| || |||||| | ||||| || ||| || |||| | | | ||| || | ||||
Sbjct 16659 ATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGA 16718
Query 130257 -GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 130315
|| | | | || || || || ||||||| | || ||||| || ||||| |||
Sbjct 16719 GGTACGTGCGTTGCT-TGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCG 16777
Query 130316 CCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 130374
|||| | | ||| || | ||| | ||||||| |||| || ||| || ||
Sbjct 16778 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATTTG 16836
Query 130375 TACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 130433
|| || || || || | | ||| ||||| || || ||||| || |||| |
Sbjct 16837 CACTTC-TCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAGCGA 16895
Query 130434 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCAGT 130490
| || ||||||| | ||||| | || | ||||||||| | |||||||
Sbjct 16896 AGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAGGCGCTTGTTCCAGT 16955
Query 130491 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531
||| ||| ||||| |||||||| | |||||| |||||||||
Sbjct 16956 CGTGAAGGTCCTTGGAGAGATCGATCTCCTCGGCAGTCCAA 16996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618409071112800
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