Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq958 107 2e-18 >seq958 Length=118480 Score = 107 bits (118), Expect = 2e-18 Identities = 190/274 (69%), Gaps = 10/274 (4%) Strand=Plus/Plus Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT----GTACTCTGCTCC 30243 || |||||||| ||| | || | ||||| || ||| | || |||||| ||||| Sbjct 101235 AGTTGATCCACGCCCTTTCCTGTATAGTCCGC----ATGGCAGTCTTCGTACTCGGCTCC 101290 Query 30244 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30303 |||||||| ||| || || || ||||| || |||| ||||||||||| ||||| || || Sbjct 101291 GAAATGCCGCCATTGAAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTG-TCCAA 101349 Query 30304 GCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30362 | || | ||||||| | ||||| || || ||| | |||||||| | || || | Sbjct 101350 GTCCTACGCTGTCCAAGTATTCTCTTGAGCCATTGCCATCCCAGATATGCACGTTCTGGT 101409 Query 30363 CAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30422 | ||| |||| ||| || || || || ||||||| |||||| | | ||| | Sbjct 101410 CTTGTAGCAGCTTGGCGTTGGTCGAGCCGGCCACAAACCACAACAGCTCGGCGAGGACAG 101469 Query 30423 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | | ||||| | |||||| |||||||| || Sbjct 101470 CTCTTAGGAAGACTCGCTTGGTGGTGAGGAGTGG 101503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406293662550960