Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq2317 98.7 9e-16
>seq2317
Length=245020
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || |||||||| || || || || || || | ||| ||||| |||| ||
Sbjct 71219 CACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGCGTTCGGCCGTCCTC 71278
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193
|||||| ||||| || || || || ||||| ||||| |||||| | | ||| |||||
Sbjct 71279 AAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGTGGG-ATACCCTCCTTGTCTT 71337
Query 39194 TGATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252
||| ||| || | ||| | | | || || |||||||| || | |||||| |
Sbjct 71338 GGATCTTCGACTTCA-CGTTGTCGATTGTGTCTGATGACTCCACTTCGAGTGTGATAGTC 71396
Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || || || || || |||||||||||
Sbjct 71397 TTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 71428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429527905405940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |