Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2317 98.7 9e-16 >seq2317 Length=245020 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || |||||||| || || || || || || | ||| ||||| |||| || Sbjct 71219 CACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGCGTTCGGCCGTCCTC 71278 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 |||||| ||||| || || || || ||||| ||||| |||||| | | ||| ||||| Sbjct 71279 AAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGTGGG-ATACCCTCCTTGTCTT 71337 Query 39194 TGATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| ||| || | ||| | | | || || |||||||| || | |||||| | Sbjct 71338 GGATCTTCGACTTCA-CGTTGTCGATTGTGTCTGATGACTCCACTTCGAGTGTGATAGTC 71396 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || || ||||||||||| Sbjct 71397 TTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 71428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429527905405940