Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq958 89.7 4e-13
>seq958
Length=118480
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/218 (71%), Gaps = 8/218 (4%)
Strand=Plus/Plus
Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074
||||||||| ||| || || || ||||| || |||| ||||||||||| ||||| || |
Sbjct 101290 CGAAATGCCGCCATTGAAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTG-TCCA 101348
Query 30075 AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT-- 30131
|| || | ||||||| | ||||| || || ||| | |||||||| | || ||
Sbjct 101349 AGTCCTACGCTGTCCAAGTATTCTCTTGAGCCATTGCCATCCCAGATATGCACGTTCTGG 101408
Query 30132 TCTCGGAG-AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30190
||| | || ||| |||| ||| || || || || ||||||| |||||| | | |
Sbjct 101409 TCTTGTAGCAGC---TTGGCGTTGGTCGAGCCGGCCACAAACCACAACAGCTCGGCGAGG 101465
Query 30191 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228
|| || | ||||| | |||||| |||||||| ||
Sbjct 101466 ACAGCTCTTAGGAAGACTCGCTTGGTGGTGAGGAGTGG 101503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406146468614680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |