Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq958 89.7 4e-13 >seq958 Length=118480 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/218 (71%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||||| ||| || || || ||||| || |||| ||||||||||| ||||| || | Sbjct 101290 CGAAATGCCGCCATTGAAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTG-TCCA 101348 Query 30075 AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT-- 30131 || || | ||||||| | ||||| || || ||| | |||||||| | || || Sbjct 101349 AGTCCTACGCTGTCCAAGTATTCTCTTGAGCCATTGCCATCCCAGATATGCACGTTCTGG 101408 Query 30132 TCTCGGAG-AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30190 ||| | || ||| |||| ||| || || || || ||||||| |||||| | | | Sbjct 101409 TCTTGTAGCAGC---TTGGCGTTGGTCGAGCCGGCCACAAACCACAACAGCTCGGCGAGG 101465 Query 30191 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 || || | ||||| | |||||| |||||||| || Sbjct 101466 ACAGCTCTTAGGAAGACTCGCTTGGTGGTGAGGAGTGG 101503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406146468614680