Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq958 113 3e-20 >seq958 Length=118480 Score = 113 bits (124), Expect = 3e-20 Identities = 195/277 (70%), Gaps = 16/277 (6%) Strand=Plus/Plus Query 27454 AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGT----GTACTCTGCTCC 27509 || |||||||| ||| | || | ||||| | |||| | || |||||| ||||| Sbjct 101235 AGTTGATCCACGCCCTTTCCTGTATAGTC----CGCATGGCAGTCTTCGTACTCGGCTCC 101290 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569 |||||||| |||||| || || ||||| || |||| ||||||||||| ||||| || || Sbjct 101291 GAAATGCCGCCATTGAAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTG-TCCAA 101349 Query 27570 GCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT--T 27626 | || | ||||||| | ||||| || || ||| | |||||||| | || || | Sbjct 101350 GTCCTACGCTGTCCAAGTATTCTCTTGAGCCATTGCCATCCCAGATATGCACGTTCTGGT 101409 Query 27627 CTCGGAG-AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGA 27685 || | || ||| |||| ||| || || || || ||||||| |||||| | | || Sbjct 101410 CTTGTAGCAGC---TTGGCGTTGGTCGAGCCGGCCACAAACCACAACAGCTCGGCGAGGA 101466 Query 27686 CGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | || | ||||| | |||||| |||||||| || Sbjct 101467 CAGCTCTTAGGAAGACTCGCTTGGTGGTGAGGAGTGG 101503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369491978612780