Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3272 87.8 3e-12 >seq3272 Length=75414 Score = 87.8 bits (96), Expect = 3e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || || ||||| |||||||| || |||||||| || | ||| || || | |||| Sbjct 16517 TCGTTGGAGAAAGTGAGGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATCGACGCG 16576 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGA 46774 |||||||| || ||||| |||||||| | || || || |||| Sbjct 16577 AAAGATCCGGAGAAGAAGATGCCTTCGATGGCGGCAAAGGCGA 16619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712904278521600