Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq864 109 1e-18
seq2317 100 7e-16
>seq864
Length=88037
Score = 109 bits (120), Expect = 1e-18
Identities = 134/181 (74%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974
|| ||||||||||| ||| | ||||| ||||| || || ||||| ||||||||||
Sbjct 47488 TTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCATCCTCGAGTTGCTTT--CCGGCGAAGA 47545
Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034
| | | ||| ||||||| | |||||| ||||| || ||||| || ||||| | |
Sbjct 47546 TCAATCGCTGTTGGTCCGGTGGGATTCCCTCCTTATCCTGAATCTTGCTCTTGACGTTGT 47605
Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
| | | |||| || ||| || || || || ||||| ||||||||||| ||||||||||
Sbjct 47606 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGA 47665
Query 152095 A 152095
|
Sbjct 47666 A 47666
>seq2317
Length=245020
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| |||||||| || ||||| || || |||||||| |||| | || | || ||
Sbjct 71444 GAGGACGAGATGAAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCGTC 71503
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | ||| ||||| | | || || ||||| ||
Sbjct 71504 CTCAAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC 71563
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| | || | | |||| || ||| || || | || || ||
Sbjct 71564 CTGGATCTTCGACTTGACATTGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGT 71623
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||| ||||||| ||||||
Sbjct 71624 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 71656
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| || || |||||||| || | | |||| || || || || || ||||||||
Sbjct 71237 CTCCTTCTGAATGTTGTAGTCAGAAAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 71296
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
||| || | ||| ||||||| | ||| || ||||| ||||| || || || || |
Sbjct 71297 GATGAGGCGCTGTTGGTCCGGTGGGATACCCTCCTTGTCTTGGATCTTCGACTTCACGTT 71356
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | ||||||| ||| ||||| || || ||||| ||||| ||||| ||||| ||
Sbjct 71357 GTCGATTGTGTCTGATGACTCCACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGAC 71416
Query 152093 GAAGACCTGCAT 152104
||||| |||||
Sbjct 71417 GAAGATTTGCAT 71428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153770832347980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |