Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015-
04-30] 3,380 sequences; 36,798,086 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq2317 150 1e-31
seq864 111 1e-19
seq2215 89.7 4e-13
>seq2317
Length=245020
Score = 150 bits (166), Expect = 1e-31
Identities = 161/211 (76%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||||||| |||||| || |||||||| |||| ||| ||| |||| ||
Sbjct 71448 ACGAGATGAAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCA 71507
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| |||||||| ||||| || |||| || | || ||||| |||
Sbjct 71508 AGTTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 71567
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | |||||||| | || |||||||||| || |||||||
Sbjct 71568 ATCTTCGACTTGACATTGT--CGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCT 71625
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||||||||| |||||||| |||||
Sbjct 71626 TGCCAGTGAGGGTCTTGACGAAGATCTGCAT 71656
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
||| || | ||| | | ||||| ||| || ||||||||||| || |||||||| || |
Sbjct 71201 TCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 71260
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|| || |||| || |||||||| ||||| ||||| | ||||| || || | ||
Sbjct 71261 AAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGTGG 71320
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289
| ||| ||||| || |||||| ||||| | | || ||||| | || |||||
Sbjct 71321 GATACCCTCCTTGTCTTGGATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTCCAC 71380
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || ||||| || ||||| ||||| ||||||||||||||
Sbjct 71381 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 71428
Score = 102 bits (112), Expect = 6e-17
Identities = 134/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || ||| |||||| ||||||||||| ||| ||| |||| | || ||
Sbjct 71675 CACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGCCCATCCTC 71734
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| ||||| ||||| ||||| | |||||||| |||| ||| | || ||||| |||
Sbjct 71735 AAGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTG 71794
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | ||||| || | ||| || ||||| | || || |||||
Sbjct 71795 GATCTTGCTCTTCACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTGATGGTCTT 71854
Query 44308 TCCCGT 44313
||| ||
Sbjct 71855 TCCAGT 71860
>seq864
Length=88037
Score = 111 bits (122), Expect = 1e-19
Identities = 139/189 (74%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 44142 TGCTCTCCTTTTGGATGTTGTAATCG--GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCC 44199
||| | |||| ||||||||||| ||| | ||||| || | || || || ||||| ||
Sbjct 47480 TGCGCACCTTCTGGATGTTGTAGTCGCTGAGAGTT--CGGCCATCCTCGAGTTGCTTTCC 47537
Query 44200 GGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT 44259
||| |||||||| ||||| || || | || | || ||||| ||| ||||| |||
Sbjct 47538 GGCGAAGATCAATCGCTGTTGGTCCGGTGGGATTCCCTCCTTATCCTGAATCTTGCTCTT 47597
Query 44260 CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGT 44319
| | | |||||||||| || |||||||| | || || ||||| |||||||||||
Sbjct 47598 GACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGT 47657
Query 44320 CTTCACGAA 44328
|||||||||
Sbjct 47658 CTTCACGAA 47666
>seq2215
Length=151005
Score = 89.7 bits (98), Expect = 4e-13
Identities = 61/69 (88%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 44270 ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329
|||||||||| ||||||||||| | || |||||||| |||||||||||||||||||||
Sbjct 66933 ATGGTGTCGGACGATTCCACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAG 66992
Query 44330 ATTTGCATG 44338
|| ||||||
Sbjct 66993 ATCTGCATG 67001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359975570645460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |