Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq14 152 5e-32 >seq14 Length=670130 Score = 152 bits (168), Expect = 5e-32 Identities = 314/459 (68%), Gaps = 6/459 (1%) Strand=Plus/Plus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||| ||||| ||| | ||||| || || ||||| || || | || Sbjct 211671 AACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACAAG 211730 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCA 16781 ||| ||||| ||||| || || |||||||| ||||| | | || ||| | | ||| | Sbjct 211731 AGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCCCAA 211790 Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841 | ||| |||||||| || ||| |||| || ||||| ||||| || ||||| |||| Sbjct 211791 AG-CAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATTCA 211849 Query 16842 TTCCTA-TAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900 | || | ||| | || |||||||| || || || || || || || ||||| ||| Sbjct 211850 TACCAAGTAATGAG-ACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGCT 211908 Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACAT 16959 || | | ||| | | || | || | | ||| ||| || | || || | Sbjct 211909 TCAGTGACAATTTTCTCGACAA-TAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATAA 211967 Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 | |||| | ||||| ||||| || || |||| | ||||||||| |||||||| || Sbjct 211968 TAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGGT 212027 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 || || ||||| |||| || || ||||||||||| || || || || ||||| || Sbjct 212028 TAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGAA 212087 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTC 17118 |||| ||| || | | |||||| || | ||||||||| Sbjct 212088 AAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTC 212126 Score = 127 bits (140), Expect = 2e-24 Identities = 479/741 (65%), Gaps = 18/741 (2%) Strand=Plus/Minus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||| ||||| ||| | || ||||||||||| || || || ||| Sbjct 578606 AACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTAA 578547 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780 || |||||||||||||| ||||| ||||||||| | || |||| || | || || Sbjct 578546 TGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAATCTTCT--TGTTACCT 578489 Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840 || | | | | | ||| || ||| |||| | |||||| ||||| || | ||| ||| Sbjct 578488 AGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATTC 578429 Query 16841 ATTCCTA-TAA-GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCG 16898 || || | ||| || | | |||||||| || || || || | ||| ||| || | Sbjct 578428 ATACCAAGTAATGAGG--CTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAG 578371 Query 16899 CTTCCTTAATAATACTAGCAACTCGTTCCTCGGA--CGGTGTATGTTTAAGATGTTTAAA 16956 | || |||| || | ||| | | | ||| ||| ||| || | ||| ||| Sbjct 578370 CCTCTGTAATTATCTTTTCAA--CAATAATTGGATCGGGTCTATTTTCCAAATGGGAAAA 578313 Query 16957 CATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAA 17016 | | || || ||||| || | || || || | | ||| | ||| |||||||| Sbjct 578312 TAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAA 578253 Query 17017 TGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGA 17076 || | || ||||| |||| || |||||||| || || | ||||| || ||||| Sbjct 578252 AGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGA 578193 Query 17077 AAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTT 17136 || || ||||| || || | || || || | | ||||| || | || || || Sbjct 578192 GAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTT 578133 Query 17137 GTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTAT 17196 | || ||||||| | |||| || || || | ||| || ||| | |||| || Sbjct 578132 ATCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAAT 578073 Query 17197 GGCCTTAAAT--AATTTCTCTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAG 17253 || || ||| || ||| | | || ||| || | ||||| || || || | ||| Sbjct 578072 AGCATTGAATAAAAATTCACGCT---CTTTAGAATCTTTAATATATGTGTCAATTAATAG 578016 Query 17254 GCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGC 17313 || | || |||||||| || ||||| || || || || |||||||| || Sbjct 578015 TGAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGC 577956 Query 17314 TTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 ||| | | ||||||| || | | || ||| ||| ||||||||| || || || || Sbjct 577955 TTCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATC 577896 Query 17374 GCTCGCGGCGAAAAACGCCAA 17394 || |||||||| || || Sbjct 577895 TGAAGCAGCGAAAAAGGCTAA 577875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544720172480