Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq14 221 1e-52
>seq14
Length=670130
Score = 221 bits (244), Expect = 1e-52
Identities = 587/891 (66%), Gaps = 27/891 (3%)
Strand=Plus/Plus
Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960
|||||| | |||| ||||| ||| | ||||| ||||| ||||| || || | |
Sbjct 211671 AACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACAAG 211730
Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAG 16020
||| |||||||||||||| || || ||||| ||||| | | | ||| | ||||
Sbjct 211731 AGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCCCAA 211790
Query 16021 TTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAAT 16080
| | |||||||| || ||| |||| || ||||||||||| ||||||||||| ||
Sbjct 211791 AGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATTCAT 211850
Query 16081 TCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTC 16140
|| | | | || |||||||| | || || ||| || ||| |||||||| |||||
Sbjct 211851 ACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGCTTC 211910
Query 16141 TTT---AATGATATCGG---TGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAA 16194
| ||| | ||| | ||| | |||| || ||| | | ||| ||
Sbjct 211911 AGTGACAATTTTCTCGACAATAGCTGGA---TCAG---GTTTATTTTGCAAGTGAGCGAA 211964
Query 16195 CATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAA 16254
| || ||| | || || |||||| ||||| |||| | ||||||||| || |||||
Sbjct 211965 TAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAA 212024
Query 16255 AGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGA 16314
||||| || |||||| |||| || || ||||| ||||| ||||||||||| || ||
Sbjct 212025 GGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGA 212084
Query 16315 AAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTT 16374
|| |||| ||| |||| || ||||||||| | |||||||||| | | || || |
Sbjct 212085 GAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATC 212144
Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434
| |||||||||| ||| || || || ||||| ||||| || | | ||
Sbjct 212145 GTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAAT 212204
Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATA---TCGATTATATACGTATCAATCAGTAA 16491
|| |||| | |||||||| |||| || | || || ||||| | | |||
Sbjct 212205 TGCATTAAGAAGAAAGTCTTTTTC---AATAGGGTCTCTAATGTAAGTATCTAACTGTAC 212261
Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551
| ||| |||| || ||||| || ||| | ||||| || |||||||| | | ||
Sbjct 212262 AGAGTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGC 212321
Query 16552 CTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611
|| | ||||| || || | |||| || | | || ||||| || | ||| ||
Sbjct 212322 TTCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATC 212381
Query 16612 ACTTGCAGCAAAAAACGCCAATA----TGTGCTTAATGAAATAT--TTTTCGTCAGATGT 16665
| ||| |||||||| ||||||| || | | || | | | ||||||| | |
Sbjct 212382 AGATGCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTT 212441
Query 16666 AAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCT 16725
| | | ||| || || ||| || | | ||| | ||| |||| ||||| |||
Sbjct 212442 ---AGTGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGA 212498
Query 16726 AGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776
|||| | ||| || ||||||| |||||| ||| |||| || |||||
Sbjct 212499 AGCCTCGTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAA 212549
Score = 136 bits (150), Expect = 4e-27
Identities = 592/928 (64%), Gaps = 19/928 (2%)
Strand=Plus/Minus
Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960
|||||| | |||| |||||| ||| | || ||||| ||||| || || || ||||
Sbjct 578606 AACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTAA 578547
Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCC 16018
|| ||||| ||||| || ||||| ||||||||| | || |||| ||| || ||
Sbjct 578546 TGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAAT--CTTCTTGTTACCT 578489
Query 16019 AGTTCCGTAACTAAT---CTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAA 16075
|| | |||||| | ||| || ||| |||| | |||||||||||| || | ||||
Sbjct 578488 AGAGC---AACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAA 578432
Query 16076 TTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACC 16135
|| || || | | | | |||||||| | ||| || ||| | || || ||
Sbjct 578431 TTCATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACA 578372
Query 16136 GCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAAC 16195
|| ||| |||| || | | || | ||| ||| | | || |||
Sbjct 578371 GCCTCTGTAATTATCTTTTCAACAATAATTGGATCGGGTCTATTTTCCAAATGGGAAAAT 578312
Query 16196 ATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAA 16255
| || || || || || || || ||||| || | | ||| | ||| || ||||||
Sbjct 578311 AATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAA 578252
Query 16256 GTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA 16315
|| | ||||||||| |||| || ||||||||||| || | || || || || ||
Sbjct 578251 GTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAG 578192
Query 16316 AAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTA 16375
|| || ||||| ||||||| || ||||| | | ||||| || | || || |||
Sbjct 578191 AAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTA 578132
Query 16376 TTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATG 16435
| || ||||||| | |||| || || || | || |||||| | |||| ||
Sbjct 578131 TCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATA 578072
Query 16436 GCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG 16495
|| || || || || || | | ||| | ||||| || ||||| | | | ||
Sbjct 578071 GCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTA--ATAGTG 578014
Query 16496 TACATTTCT--GAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCT 16553
| || ||| |||||||| || || || || || || ||||| ||||| ||| |
Sbjct 578013 AATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTT 577954
Query 16554 CCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCAC 16613
| | | |||| || || | |||| ||| | | || || || || ||||| ||
Sbjct 577953 CTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTG 577894
Query 16614 TTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAG---AA 16670
||||| ||||| || || | | | ||| ||| | || || |||| |
Sbjct 577893 AAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTAT 577834
Query 16671 TATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCA-AAAGCTAGCC 16729
| | |||||| | |||||| || ||| | |||||| | ||||| |||| | ||
Sbjct 577833 TTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGAT-GCT 577775
Query 16730 ACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCTA 16789
| |||||||||||||||| ||| || || | | | | || || || | ||| ||||
Sbjct 577774 TCAGCCTTTTTATACATTTGCCAGATCTCGTGGAACTTAATTGGGAAGAGGACAAATCTT 577715
Query 16790 TCTAAGGATTCCTTTAACACGGGTTCAT 16817
| |||| |||| | ||||||||
Sbjct 577714 CTTTTATTTTCCATTAAAATGGGTTCAT 577687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511413530595520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |