Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq21 167 2e-36 >seq21 Length=453462 Score = 167 bits (184), Expect = 2e-36 Identities = 300/433 (69%), Gaps = 18/433 (4%) Strand=Plus/Minus Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736 ||||| |||||||| |||| || ||| | ||| |||||||| | ||| || ||||| || Sbjct 131548 TTTAA-AGCATCAACATGATTTAAATAAACGTGTGCATCTCCAAGAGTGTGAATAAAATC 131490 Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796 ||| | | | || | |||||||||||||| |||||||||| ||| ||||| Sbjct 131489 ACCACACTCCATATCACAAACATGAGCAATCATTTTTGTTAAAAGAGCATATGATGCAAT 131430 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGC-- 101854 |||||| || |||||||| |||||||| |||||||| |||| ||| |||||| Sbjct 131429 GTTAAAGGGGACTCCTAAACCCATATCGCAAGATCTTTGGTACAAAACACAAGAAAGCTC 131370 Query 101855 ---TTTC-CATC------ACAG---ACATAAAATTGACTTAATACATGACAAGGCGGCAA 101901 |||| ||| | || ||||||||||| || | |||||| || |||| Sbjct 131369 TGGTTTCTTATCCTTTGGAAAGTTAACATAAAATTGTGCAAACATATGACATGGTGGCAG 131310 Query 101902 CACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGG 101961 ||||||| | || || | | |||||| ||| | | | || |||| ||| || Sbjct 131309 AGCCATTTTTGAAAAATCCGCAGGATTCCAGGCAGATAAAATGATTCTTCGATCATATGG 131250 Query 101962 GTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC 102021 ||| |||||| ||| ||| | | ||| || ||||| || | ||| ||||||| Sbjct 131249 GTTATTTTTTAATTTATAAATAACTTCCGCTAACTGATCAACACCCTGACCTGTATAATC 131190 Query 102022 GCGCCCAACACCTT-TATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTC 102080 ||| ||| || |||||| || || ||||||||||| || || ||||| ||||| | Sbjct 131189 -CGCATCACAATTTGTATATTTAGCACCAAAATGCCTCCATTGGAAGCCATATACAGGAC 131131 Query 102081 CAAGATCTCCTTC 102093 | ||||| || || Sbjct 131130 CCAGATCACCCTC 131118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250601226136