Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq21 125 6e-24
seq5 105 6e-18
seq8 98.7 9e-16
seq12 82.4 7e-11
>seq21
Length=453462
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||| || |||||||| | |||||||| ||||| |||||||||||
Sbjct 371752 TACCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAG 371693
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || ||| || || ||||| ||||| | || | ||| || ||||| || |
Sbjct 371692 ATAAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGG 371633
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||||||| || ||| |||||| | |||| || || || ||||
Sbjct 371632 GAATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGA 371573
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | ||||| || || || || || ||||||||||||||
Sbjct 371572 CCTCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq5
Length=1301127
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || | ||||||||| ||||| || | || || || ||||| |||||||||||
Sbjct 1173645 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGA 1173704
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||| || ||| || | || || ||||| |||| | ||| || || || |||||
Sbjct 1173705 TAAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGG 1173764
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || |||||||| || ||| ||||| | || | || || | ||| ||
Sbjct 1173765 GATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTAC 1173824
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| ||| | || || ||||| || ||||| ||||||||||||||
Sbjct 1173825 CTCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 1173872
>seq8
Length=1087023
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||||||| ||||| || | || || || |||||||||||||| ||
Sbjct 676684 TACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAG 676743
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || || || || | ||||| || || |||| | | || || || ||||
Sbjct 676744 ATAAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAG 676803
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||||||| ||||||| ||||| | || | ||||| | | || |
Sbjct 676804 GAATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAA 676863
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || | ||||| ||||||| ||||| || || ||||||||
Sbjct 676864 CCTCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 676912
>seq12
Length=712717
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580
||||| | ||||| || | || || || ||||| |||||||| || | || ||
Sbjct 150934 AATCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGG 150993
Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640
||| || | || || ||||| | || | ||| || ||||| ||||| || ||||||
Sbjct 150994 CCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCC 151053
Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700
|| ||| ||| ||| ||| || | || | ||||| | ||| ||||| | ||
Sbjct 151054 TTATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTA 151113
Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || ||||| ||||||||||||||
Sbjct 151114 ATTGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCAT 151151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829680926112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |