Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq14 266 3e-66 >seq14 Length=670130 Score = 266 bits (294), Expect = 3e-66 Identities = 621/921 (67%), Gaps = 27/921 (3%) Strand=Plus/Minus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 ||||||||| ||| ||||||||| || || || ||||| || || ||||||||||||| Sbjct 578597 TTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTAATGAAATATT 578538 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAA 16059 ||||| || ||||| ||||| | |||| | ||| || | | | || | ||| Sbjct 578537 CTCCATGAAGTCAAATGGATTAGT--AACATT-GTAAATCTTCTTGT-TACCTAGAGCAA 578482 Query 16060 CAATAAT-CTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTA 16118 | | || | ||| || ||| |||| | ||| || ||| |||| || ||||| || | Sbjct 578481 CTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATTCATACCAA 578422 Query 16119 TTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGA 16178 |||| | || | || ||||| || | | || || ||| | || || || | | Sbjct 578421 GTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGCCTCTGTAA 578362 Query 16179 TTATATCTCTTACTACACTATTTAACGGA--GGGTTTAAT----AAGTGTTTAAACATTA 16232 |||| | || | ||| || || ||| |||| || | || || ||| | || Sbjct 578361 TTATCT---TTTCAACAATAATT---GGATCGGGTCTATTTTCCAAATGGGAAAATAATA 578308 Query 16233 TACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAA 16292 |||||||||||| || | ||||| || | || || || || || ||||| |||| Sbjct 578307 AGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGTAA 578248 Query 16293 GACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGA 16352 | |||||||||| |||| ||||| | ||| || |||| || || |||||||| || | Sbjct 578247 GGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAAAA 578188 Query 16353 ATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttacttt 16412 | ||||||||||| || || || ||||| | || ||| | | | | ||| | Sbjct 578187 AAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTA-TCA 578129 Query 16413 cta-tccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCA 16471 ||| ||||| || |||||||| ||| || | |||| ||| | || || || ||| Sbjct 578128 CTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAGCA 578069 Query 16472 TTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATAC 16531 || |||||| | | ||||| |||| |||||| || || |||| || ||| Sbjct 578068 TTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGTGAATAT 578009 Query 16532 ATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGAT 16591 | || || || ||||| ||||| || || |||||||||||||| ||||||| | | Sbjct 578008 GTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTTCTGGT 577949 Query 16592 ATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCT 16651 |||| || |||| |||| |||| |||| ||||||||||| || ||||| ||| Sbjct 577948 GTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAAGCA 577889 Query 16652 GCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGT-TATCTGAAAGTT--TTAAC 16708 || ||||| || | | | || ||||||| || | | | | || || || | Sbjct 577888 GCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTATTTTCC 577829 Query 16709 CAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCC 16768 || ||| || |||||| |||||| | ||||| ||||||| ||||| || ||||| Sbjct 577828 CAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCTTCAGCC 577769 Query 16769 TTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA-CTTATTTAA 16827 ||||||||||||| ||| || || | | | ||| || || | ||| | ||| ||| | Sbjct 577768 TTTTTATACATTTGCCAGATCTCGTGGAACTTAATTGGGAAGAGGACAAATCTTCTTTTA 577709 Query 16828 TGTTGGTTTTAAAATAGGTTC 16848 | || ||||||| ||||| Sbjct 577708 T-TTTCCATTAAAATGGGTTC 577689 Score = 241 bits (266), Expect = 1e-58 Identities = 594/890 (67%), Gaps = 31/890 (3%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 |||||||| || ||||||||||||||||||||| || || || | | ||||||||| Sbjct 211681 TTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACAAGAGAAATATTT 211740 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATA---GTATTTATCGCATCCCAATTCCAAC 16060 |||||||| || ||||||||| | | | ||| | ||||| |||||| | | Sbjct 211741 TCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTAT---TTCCCAAAGCAACG 211797 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 | |||||||| || ||| |||| || || || ||| || || || ||||| || | | Sbjct 211798 AGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATTCATACCAAGT 211857 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 ||| ||||| | || || || || | | |||||| || ||| |||||| ||| Sbjct 211858 AATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGCTTCAGTGACA 211917 Query 16181 ATATCTCTTACTACACTATTTAACGGA--GGGTTTAAT----AAGTGTTTAAACATTATA 16234 || | ||| | ||| || | ||| |||||| | ||||| || | || | Sbjct 211918 AT-TTTCT--CGACAATAGCT---GGATCAGGTTTATTTTGCAAGTGAGCGAATAATAAA 211971 Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 || ||||||| ||| | ||||| || | || || | || || ||||| || | | Sbjct 211972 CATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGGTTAAA 212031 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||||| |||| ||||| | ||||||||| || |||||||| ||||| || ||| Sbjct 212032 CCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGAAAAAT 212091 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTA-CGTTCTAtttttactttc 16413 | |||||||| | ||||| ||||| ||||| || || | | || | | || Sbjct 212092 ACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCGTCGTT- 212150 Query 16414 tatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473 |||||||| || ||| | || || ||||| | ||| ||||| | |||||||| Sbjct 212151 AATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTGCATT 212210 Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533 || | | | | |||||| | ||| ||| |||||||||| ||| | || | Sbjct 212211 AAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAGTAAGT 212270 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 ||| ||||| ||||| || | ||||| || ||||| || | | | ||||| | || Sbjct 212271 TTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCAGGAAT 212330 Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 ||| || || | |||| | || |||| ||||| ||||| | ||||| ||||| Sbjct 212331 TTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGATGCTGC 212390 Query 16654 AAAAAACGCAAGTA----TGTGTTTAATAAAAttt--ttttCG-TTATCTGAAAGTTTTA 16706 |||||| || | || || | | || || | | |||||| ||| || | || Sbjct 212391 AAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGTGT---- 212446 Query 16707 ACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAG 16766 |||||||| | ||| || | | ||| | || ||| |||||| || ||||| | Sbjct 212447 CCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTCGT 212506 Query 16767 CCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACA 16816 ||| || ||||||| ||| || || | || ||| ||||||| |||| Sbjct 212507 GCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACA 212556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511213729600