Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq14 313 2e-80 >seq14 Length=670130 Score = 313 bits (346), Expect = 2e-80 Identities = 632/926 (68%), Gaps = 15/926 (2%) Strand=Plus/Plus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| || | |||||||| || |||||| ||||||||||| ||||| ||||| | Sbjct 211669 ATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACA 211728 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGA--CATAAACACTTTATCACAAC 14018 || || |||||||||||||| || || |||||||| | ||||||| |||| | | | Sbjct 211729 AGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAAC-CTTTTT-ATTTC 211786 Query 14019 CTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAAT 14078 | | | | || |||||||| |||| | ||||| |||||| |||| || || |||| Sbjct 211787 CCAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAAT 211846 Query 14079 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 14138 ||||||| | || | ||||||| | ||| || |||||||||| || |||| Sbjct 211847 TCATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAG 211906 Query 14139 CCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 14198 | || | | ||| || | ||| | | ||| || || | || || | Sbjct 211907 CTTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATA 211966 Query 14199 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 14258 |||||| ||||||| ||| || || ||||||| || |||||||| || ||||| | Sbjct 211967 ATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGG 212026 Query 14259 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAA 14318 |||| || ||||| || |||| ||||| ||||||||||| ||||| |||||||| || | Sbjct 212027 TTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGA 212086 Query 14319 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14378 | |||| || |||| | ||||| || | ||||||||| ||||| |||||| | | Sbjct 212087 AAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCG- 212145 Query 14379 TCGAT-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14437 ||| | |||||||| || ||| |||| || | ||| ||| | || | |||| Sbjct 212146 TCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATT 212205 Query 14438 GCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14497 ||||||| | | || || || ||| | |||||| ||||| | ||| Sbjct 212206 GCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAG 212265 Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557 || ||||||| ||||| ||||| | ||||| || ||||| |||| | | ||||| Sbjct 212266 TAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCA 212325 Query 14558 GACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14617 | ||| ||||||| |||| | || | |||||||||||||| | ||||||| Sbjct 212326 GGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGAT 212385 Query 14618 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC---TTCATT--GCTGAGTT 14672 ||||||||||| ||||||| || |||||| || ||| ||| || || || Sbjct 212386 GCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAG-- 212443 Query 14673 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAA 14732 | | ||| || | || |||||||| |||||| | ||| || ||||| || ||| Sbjct 212444 TGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCT 212503 Query 14733 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTTG 14792 | || || |||||| ||| ||||| |||| || ||||| | ||||||| || Sbjct 212504 CGTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATC-TG 212562 Query 14793 AAGATG-TTTCTTTAAGAATTGGTTC 14817 || |||| || |||| |||||| Sbjct 212563 CGTTTGTTTTCCTTGAGAAGTGGTTC 212588 Score = 309 bits (342), Expect = 3e-79 Identities = 594/869 (68%), Gaps = 15/869 (2%) Strand=Plus/Minus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| || ||||||||| ||| |||||| || || || ||||| || ||||| | Sbjct 578608 ATAACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCT 578549 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACT-TTATCACAACC 14019 | ||| ||||| ||||| || ||||||||||| || |||| | | || | ||| Sbjct 578548 AATGAAATATTCTCCATGAAGTCAAATGGATTAGTA-ACATTGTAAATCTTCTTGTTACC 578490 Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079 ||| | | || | | ||| |||| | |||| ||||||| |||| |||| ||||| Sbjct 578489 TAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATT 578430 Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 |||||| | || | | |||| || || || |||| || || |||| ||||| Sbjct 578429 CATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGC 578370 Query 14140 CTCGTTTATAATAATCGT---AATAATTTCATTAGAAGGAGGATATTTT--AGATGTTTA 14194 ||| | |||| ||| | || ||| ||| || | | |||||| | ||| | Sbjct 578369 CTC---TGTAATTATCTTTTCAACAATA--ATTGGATCGGGTCTATTTTCCAAATGGGAA 578315 Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254 || | ||| || ||||||||| ||||| || ||||| | || || | ||| || ||| Sbjct 578314 AATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAA 578255 Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314 || || | |||||||| || |||| ||||||||||| || || | ||||| || || Sbjct 578254 AAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCA 578195 Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374 || || || || || ||||| ||||| || || | | ||||| |||| |||||| Sbjct 578194 GAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCC 578135 Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434 || | |||||| || |||||| || | || || |||||| || | ||||| Sbjct 578134 TTATCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCA 578075 Query 14435 ATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14494 |||||||| |||||| ||| |||||||| | | ||| ||||| ||||| | || Sbjct 578074 ATAGCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGT 578015 Query 14495 CTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCT 14554 ||| | ||||||||||| |||||||| || || ||||||||||| || ||||| Sbjct 578014 GAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCT 577955 Query 14555 TCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCA 14614 |||| ||| ||||| | |||| |||| | |||||||| ||||| |||||||| Sbjct 577954 TCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCT 577895 Query 14615 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAG---T 14671 ||| || ||||| || || | | | |||||| | |||| || || | || Sbjct 577894 GAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTA 577835 Query 14672 TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCA 14731 |||| |||||| | | ||| ||| | ||| | ||| ||| | ||||| ||| || Sbjct 577834 TTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCT 577775 Query 14732 ACAGCTTTTTTATACATTACCCATATTTC 14760 |||| |||||||||||| ||| || || Sbjct 577774 TCAGCCTTTTTATACATTTGCCAGATCTC 577746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344780012480