Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq14 313 2e-80
>seq14
Length=670130
Score = 313 bits (346), Expect = 2e-80
Identities = 632/926 (68%), Gaps = 15/926 (2%)
Strand=Plus/Plus
Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960
||||| || | |||||||| || |||||| ||||||||||| ||||| ||||| |
Sbjct 211669 ATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACA 211728
Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGA--CATAAACACTTTATCACAAC 14018
|| || |||||||||||||| || || |||||||| | ||||||| |||| | | |
Sbjct 211729 AGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAAC-CTTTTT-ATTTC 211786
Query 14019 CTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAAT 14078
| | | | || |||||||| |||| | ||||| |||||| |||| || || ||||
Sbjct 211787 CCAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAAT 211846
Query 14079 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 14138
||||||| | || | ||||||| | ||| || |||||||||| || ||||
Sbjct 211847 TCATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAG 211906
Query 14139 CCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 14198
| || | | ||| || | ||| | | ||| || || | || || |
Sbjct 211907 CTTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATA 211966
Query 14199 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 14258
|||||| ||||||| ||| || || ||||||| || |||||||| || ||||| |
Sbjct 211967 ATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGG 212026
Query 14259 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAA 14318
|||| || ||||| || |||| ||||| ||||||||||| ||||| |||||||| || |
Sbjct 212027 TTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGA 212086
Query 14319 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14378
| |||| || |||| | ||||| || | ||||||||| ||||| |||||| | |
Sbjct 212087 AAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCG- 212145
Query 14379 TCGAT-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14437
||| | |||||||| || ||| |||| || | ||| ||| | || | ||||
Sbjct 212146 TCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATT 212205
Query 14438 GCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14497
||||||| | | || || || ||| | |||||| ||||| | |||
Sbjct 212206 GCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAG 212265
Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557
|| ||||||| ||||| ||||| | ||||| || ||||| |||| | | |||||
Sbjct 212266 TAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCA 212325
Query 14558 GACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14617
| ||| ||||||| |||| | || | |||||||||||||| | |||||||
Sbjct 212326 GGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGAT 212385
Query 14618 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC---TTCATT--GCTGAGTT 14672
||||||||||| ||||||| || |||||| || ||| ||| || || ||
Sbjct 212386 GCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAG-- 212443
Query 14673 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAA 14732
| | ||| || | || |||||||| |||||| | ||| || ||||| || |||
Sbjct 212444 TGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCT 212503
Query 14733 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTTG 14792
| || || |||||| ||| ||||| |||| || ||||| | ||||||| ||
Sbjct 212504 CGTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATC-TG 212562
Query 14793 AAGATG-TTTCTTTAAGAATTGGTTC 14817
|| |||| || |||| ||||||
Sbjct 212563 CGTTTGTTTTCCTTGAGAAGTGGTTC 212588
Score = 309 bits (342), Expect = 3e-79
Identities = 594/869 (68%), Gaps = 15/869 (2%)
Strand=Plus/Minus
Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960
||||| || ||||||||| ||| |||||| || || || ||||| || ||||| |
Sbjct 578608 ATAACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCT 578549
Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACT-TTATCACAACC 14019
| ||| ||||| ||||| || ||||||||||| || |||| | | || | |||
Sbjct 578548 AATGAAATATTCTCCATGAAGTCAAATGGATTAGTA-ACATTGTAAATCTTCTTGTTACC 578490
Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079
||| | | || | | ||| |||| | |||| ||||||| |||| |||| |||||
Sbjct 578489 TAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATT 578430
Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139
|||||| | || | | |||| || || || |||| || || |||| |||||
Sbjct 578429 CATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGC 578370
Query 14140 CTCGTTTATAATAATCGT---AATAATTTCATTAGAAGGAGGATATTTT--AGATGTTTA 14194
||| | |||| ||| | || ||| ||| || | | |||||| | ||| |
Sbjct 578369 CTC---TGTAATTATCTTTTCAACAATA--ATTGGATCGGGTCTATTTTCCAAATGGGAA 578315
Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254
|| | ||| || ||||||||| ||||| || ||||| | || || | ||| || |||
Sbjct 578314 AATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAA 578255
Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314
|| || | |||||||| || |||| ||||||||||| || || | ||||| || ||
Sbjct 578254 AAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCA 578195
Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374
|| || || || || ||||| ||||| || || | | ||||| |||| ||||||
Sbjct 578194 GAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCC 578135
Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434
|| | |||||| || |||||| || | || || |||||| || | |||||
Sbjct 578134 TTATCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCA 578075
Query 14435 ATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14494
|||||||| |||||| ||| |||||||| | | ||| ||||| ||||| | ||
Sbjct 578074 ATAGCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGT 578015
Query 14495 CTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCT 14554
||| | ||||||||||| |||||||| || || ||||||||||| || |||||
Sbjct 578014 GAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCT 577955
Query 14555 TCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCA 14614
|||| ||| ||||| | |||| |||| | |||||||| ||||| ||||||||
Sbjct 577954 TCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCT 577895
Query 14615 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAG---T 14671
||| || ||||| || || | | | |||||| | |||| || || | ||
Sbjct 577894 GAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTA 577835
Query 14672 TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCA 14731
|||| |||||| | | ||| ||| | ||| | ||| ||| | ||||| ||| ||
Sbjct 577834 TTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCT 577775
Query 14732 ACAGCTTTTTTATACATTACCCATATTTC 14760
|||| |||||||||||| ||| || ||
Sbjct 577774 TCAGCCTTTTTATACATTTGCCAGATCTC 577746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482344780012480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |