Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq8 96.9 3e-15 seq12 82.4 6e-11 >seq8 Length=1087023 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179 |||| ||||| ||||| ||||||||||||||||| | | || | ||||| ||| Sbjct 676709 ATGTAAAGTG--GATTCCTTTTGAATGTTGTAGTCAGATAAGGTACGTCCGTCTTCTAAT 676766 Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239 ||||| || ||| |||| | ||||||||| || || | |||||||| || |||| Sbjct 676767 TGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATT 676826 Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299 | | ||| || | ||| ||||||| || || || | || ||| |||| ||| Sbjct 676827 TTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACCTCGAGAGTAATGGTTTTACCG 676886 Query 18300 GTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| ||||| || || || |||||| Sbjct 676887 GTCAAGGTTTTGACGAAGATCTGCATT 676913 >seq12 Length=712717 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| || |||| || | |||||||| ||||| ||||||||||| | | || | Sbjct 150936 TCTGAGAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAGTCAGATAAGGTACGGCC 150995 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||||||||| || || ||| | || | | ||||||||| || | || ||||| Sbjct 150996 ATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATTCCCTCCTT 151055 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 ||| ||| | | ||||| | ||| ||||||| | ||| |||| || || Sbjct 151056 ATCTTGAATCTTTGATTTGACATTATCAATAGTGTCAGATGACTCAACCTCAAGAGTAAT 151115 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 | || || || | ||||| |||||||| ||||||||| Sbjct 151116 TGTCTTCCCTGTAAGGGTTTTAACAAAAATCTGCATTTTT 151155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343371237320