Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq14 143 2e-29
seq5 87.8 2e-12
seq1 87.8 2e-12
>seq14
Length=670130
Score = 143 bits (158), Expect = 2e-29
Identities = 585/912 (64%), Gaps = 39/912 (4%)
Strand=Plus/Plus
Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCA-GACATTTGGAACATGTACAAAAAGGCAGA 57595
||||||||| | || || ||| | | |||| || || ||| | ||||| |||||||| ||
Sbjct 577716 AGATTTGTCCTCTTCCCAATTAAGT-TCCACGAGATCTGGCAAATGTATAAAAAGGCTGA 577774
Query 57596 AGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGA--- 57652
|||||| || ||||| | |||||| | || | ||| ||| | | ||||||||
Sbjct 577775 AGCATCTTTCTGGACTGCTGAAGAAATTGATTTAAGTAAAGATATTGGTGATTGGGAAAA 577834
Query 57653 TTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATC 57712
| || || || |||| | ||||||| || ||| || || |||||||| || ||
Sbjct 577835 TAAGCTTAATAAAGATGAGCGTTTTTTTATTTCACGCGTCTTAGCCTTTTTCGCTGCTTC 577894
Query 57713 CGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGA 57772
||||||||||||||||| ||||| || |||| ||||| || || ||| | ||
Sbjct 577895 AGATGGTATTGTTAACGAAAATTTAGTTGAAAACTTTTCGGCTGAGGTTCAAACACCAGA 577954
Query 57773 GGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTC 57832
|| | |||||||| || || ||| | || ||||| | || || || | |||||
Sbjct 577955 AGCTAAGTGCTTTTATGGTTTCCAAATCATGATGGAAAATATACACTCTGAGACATATTC 578014
Query 57833 GCTACTCATCGATACGTACGTGAAGGA---CAACGA-CGAGAAACGTAGACTGTTCAACG 57888
||| | || || || || | || || || || || ||| | | ||||| |
Sbjct 578015 ACTATTAATTGACACATATATTAAAGATTCTAAAGAGCGTGAATTTT----TATTCAATG 578070
Query 57889 CGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAA 57948
| || |||| | || || ||||||||||| ||| | | | |||||| |
Sbjct 578071 CTATTGAAAATGTTCCTTGTATTAAGAAGAAGGCAGATTGGGCTTTAAGATGGAT---TA 578127
Query 57949 GCGCCACG---GCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATAT 58005
| | | | || || || || | || | || ||||| || || |||||||| |
Sbjct 578128 GTGATAAGGAAGCATTATTTGCTGAACGTCTTGTTGCTTTCGCTGCTGTTGAAGGTATTT 578187
Query 58006 TCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCC 58065
| || || || || || | || || ||| | || || | || | ||||| ||||
Sbjct 578188 TTTTCTCTGGTTCTTTCGCATCTATTTTCTGGTTAAAAAAGAGAGGTTTAATGCCAGGCC 578247
Query 58066 TGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCC 58125
| || ||| || || ||||| | || || || ||||| || ||||||||||| |||
Sbjct 578248 TTACTTTTTCTAATGAATTGATCTGTCGTGATGAAGGTCTTCACACTGATTTTGCTTGCT 578307
Query 58126 TAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCA-TCTTG-----GACATTA 58179
|| | | || || | | |||| ||| |||| | | ||| | || |
Sbjct 578308 TATTATTTTCCCATTTGGAAAATAGACC------CGATCCAATTATTGTTGAAAAGATAA 578361
Query 58180 TCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGC 58239
| || ||||| || | || || || || | | || || || || || | | | |
Sbjct 578362 TTACAGAGGCTGTAACTATTGAGAAGGAATACTTTACAGATGCTCTTCCAGCCTCATTAC 578421
Query 58240 TCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTT---- 58295
| |||||||| ||||||||| | || |||| | ||||||||| | |||
Sbjct 578422 TTGGTATGAATTGCAATTTGATGTGTCAATATGTTGAATATGTTGCCGATCGTCTTTTAG 578481
Query 58296 TTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAAT 58355
|||||| | | | || || |||||| | ||||| ||||| || ||| |
Sbjct 578482 TTGCTCTAGGTAACAAGA-AG---ATTTACAATGTTACTAATCCATTTGACTTCATGGAG 578537
Query 58356 CTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAA 58415
|| || | | || ||||||||||||||||| || | |||| || |||||||||
Sbjct 578538 AATATTTCATTAGCTGGTAAGACAAACTTTTTCGAGAAGAGAGTTTCTGATTATCAAAAA 578597
Query 58416 TACGGCGTGATG 58427
||| || |||
Sbjct 578598 GCCGGTGTTATG 578609
Score = 132 bits (146), Expect = 4e-26
Identities = 589/922 (64%), Gaps = 27/922 (3%)
Strand=Plus/Minus
Query 57508 ATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAG 57567
||||||||||| | | || || || |||||||| |||||||| ||| ||||| |
Sbjct 212590 ATGAACCACTTCTCAAGGAAAACAAACGCAGATTTGTTATGTTTCCAATTAAATATGGTG 212531
Query 57568 ACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACC 57627
| |||||| | |||||||| ||| || || || || ||||| || ||| | || |
Sbjct 212530 AAATTTGGCAAATGTACAAGAAGCACGAGGCTTCCTTCTGGACTACAGAGGAAATTGATC 212471
Query 57628 TGTCTAAGGATCTGAGCGATTGGGA---TTCCCTCAAAGAATCTGAGAGAAATTTTAT-T 57683
| |||||||| | || ||||| | | || ||| ||||||| ||||| |
Sbjct 212470 TTGCTAAGGATATACCTGACTGGGACACTAAGTTAAACGAAAATGAGAGATTCTTTATCT 212411
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
|| | || ||||| ||||| || ||||| |||||| ||||||| || ||||| || ||
Sbjct 212410 CAAGA-GTATTGGCTTTTTTTGCAGCATCTGATGGTCTTGTTAATGAAAATTTAGTTGAG 212352
Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803
| |||||| ||| || ||| | | || || | | | || || || || || |
Sbjct 212351 AACTTTTCAGCAGAGGTTCAAATTCCTGAAGCCAAAAGTTTCTATGGGTTCCAGATCATG 212292
Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863
| ||||| | ||||| |||| || || ||| | ||||| ||| | | || | |
Sbjct 212291 ACAGAAAATATACATTCTGAAACTTACTCTGTACAGTTAGATACTTACATTA--GAGACC 212234
Query 57864 GACGAGAAACGTAGACTGT----TCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAA 57919
|||| ||||| | | || || || | | || || ||| ||||
Sbjct 212233 CTATTGAAA--AAGACTTTCTTCTTAATGCAATTGTCAACATCCCATGTATCAAACAGAA 212176
Query 57920 GGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979
||| || ||| | | |||||||| || || || || | || | || |
Sbjct 212175 GGCTGACTGGACTTTGAAATGGATTAACGACGATGAAGCATTATTTGGGGAACGATTAGT 212116
Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039
|| || || | | |||||| |||| || || || ||||| || ||||||||| |
Sbjct 212115 TGCTTTTGCAACTATTGAAGGTGTATTTTTCTCTGGATCATTTGCTGCCATATTTTGGTT 212056
Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099
||| || | || | ||||| || | || ||| || || | || | || || ||
Sbjct 212055 GAAAAAGAGAGGTTTAATGCCTGGTTTAACCTTTTCTAATGAACTTATCTGTCGAGATGA 211996
Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC-GA-CG 58157
||||| ||||| ||||||| || || | | | ||||| | |||||||| || |
Sbjct 211995 AGGTCTACATACAGATTTTGGATGTTTATTATTCGCTCACTTGCAAAATAAACCTGATCC 211936
Query 58158 CGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217
| || | || | | ||| |||| || || || | ||| ||||| || | | |||
Sbjct 211935 AGCTATTG--TCGAGAAAATTGTCACTGAAGCTGTTGTGATTGAAAAAGAATACTTTACC 211878
Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277
|| || || || || | | || |||||||| || ||||||| | ||||||||
Sbjct 211877 GAGGCTCTTCCTGTCTCATTACTTGGTATGAATTGCGACTTGATGTGTCAATACATTGAA 211818
Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA-----TTACAACACGA 58332
| |||||| || ||| ||||||| || || | || | ||| | | |
Sbjct 211817 TATGTTGCTGATAGA---TTGCTCG--TTGCTTTGGGAAATAAAAAGGTTTATGATGCTA 211763
Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392
|||||| || || |||||| | || || || | || ||||| || || || ||||
Sbjct 211762 CAAATCCTTTCGACTTTATGGAAAATATTTCTCTTGTTGGTAAGACTAATTTCTTTGAAA 211703
Query 58393 aaaaaGTTAGCGAATATCAAAA 58414
| | |||| || ||||||||
Sbjct 211702 AGAGAGTTTCAGATTATCAAAA 211681
>seq5
Length=1301127
Score = 87.8 bits (96), Expect = 2e-12
Identities = 167/240 (70%), Gaps = 6/240 (3%)
Strand=Plus/Minus
Query 31185 AATCA--AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGT 31242
||||| || ||||| ||||| || || || || || || || || || ||| |||| ||
Sbjct 1173882 AATCACCAAGATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGT 1173823
Query 31243 TGAACCGTCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGC 31301
|| | ||||| | | | || | || || || ||| | |||||||||||| | |
Sbjct 1173822 AGAGTCATCCGATACTATTGACAATGTTAAGTCAAAGA-TCCAGGACAAGGAAGGAATCC 1173764
Query 31302 CGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATG 31360
| || ||||| || ||| |||| || ||||| || || || ||||| | | | ||| |
Sbjct 1173763 CTCCAGACCAACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGA-TGGACGTACTTTA 1173705
Query 31361 AGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||||| ||| | ||| |||| | ||| | || || |||
Sbjct 1173704 TCTGATTACAACATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGGT 1173645
>seq1
Length=2214157
Score = 87.8 bits (96), Expect = 2e-12
Identities = 462/730 (63%), Gaps = 16/730 (2%)
Strand=Plus/Plus
Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296
||||||| || || |||| || || || |||||||| |||| ||| || | ||
Sbjct 31861 CCTTCTTTTTCATATTTTTCATATAATGCTTCAAATTCATCACCATAAACATCTGAAAGA 31920
Query 23297 CCGGGCGATTGCATC--GGACACATGA-GACTCCACATTGAGTCATTTT---CAACGCGT 23350
|| || || | ||| || | || | ||| |||||| |||||| |||| | |
Sbjct 31921 CCAGG-GACTTCATTTGGGGAAAATAATGAC----CATTGAC-CATTTTGTTCAACTCTT 31974
Query 23351 CTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCT 23410
|||||||| | ||| | ||||||| || || | || | || | | || |||
Sbjct 31975 CTCATAAATAAATCAGAAATCCATAATGCTGCAAATAAATCTCTTGCTCTAATTTCTTCT 32034
Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470
|| || || ||| | | ||| | | | || || || || |||||||| || || |
Sbjct 32035 TTACCATGATTTTTTCTAATATCAATATAATCAAAAACATCAGCATGCCATGGTTCCAAA 32094
Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530
|| | ||||| || || ||||| ||||| || || ||||| || || | || || |||
Sbjct 32095 TACATTGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTG 32154
Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTC 23590
|| | || | || ||| || | | ||| || || | || | || || | |
Sbjct 32155 TTAAAAACACGTAACATTGGAATAATACCATTAGATGTACCATTTGTACCTGCAATATAA 32214
Query 23591 GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATC 23650
||||| | || || || |||| || | ||| || ||||| | ||||| || ||
Sbjct 32215 GAACCAGTACTTCTAATATTATGAATATGAAGACCAATTCCTCCAGCTGATTTTGAAATT 32274
Query 23651 ATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACC 23710
| || || ||| | ||| || || || || || || || ||||| | || |
Sbjct 32275 AAAGCACAAGTTTTTAAAGTATCATAAATACCTTCAATTGAATCTTCTTTCATAGCAATA 32334
Query 23711 AAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCG 23770
| ||||| ||||||||||| | || || ||| | || || | || || ||
Sbjct 32335 AGAAAACAAGAAGACATTTGTGGTTGAGGAGTACCAGCATTAAATAAAGTGGGAGAAGCA 32394
Query 23771 TGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCT 23830
|| || || ||| ||||||| ||| || || || ||| | ||||| || ||
Sbjct 32395 TGAGTGAAATATTTTAATGACATTAAATTATAGGTTTCAATGACTTTTTCAATATCATCA 32454
Query 23831 CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC--GACCGTGACGC 23888
|| || ||||| | || || | ||| || | | ||| ||||| || | | | | |
Sbjct 32455 CCATGAATACCAACAGCAACTCTCATAATTAAATGTTGTGGTCTTTCAGCAACTTTA--C 32512
Query 23889 CGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAA 23948
| | || | | || || ||||| | || | |||||||| ||||| | | ||| | |
Sbjct 32513 CATCAAGTCTTAAAAGGTATGATCTTTCAAGAGTTTTAAAACCAAAGAAATTATATTGGA 32572
Query 23949 AGTCACGATC 23958
| ||||||||
Sbjct 32573 AATCACGATC 32582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765642197120
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