Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq14 125 1e-23
seq21 118 2e-21
>seq14
Length=670130
Score = 125 bits (138), Expect = 1e-23
Identities = 308/465 (66%), Gaps = 24/465 (5%)
Strand=Plus/Minus
Query 101901 ATTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCAT 101960
|||||| ||||| | | ||||| ||||| | ||||||| | || || ||| |||
Sbjct 212133 ATTTGG-GGAACGATTAGTTGCTTTTGCAACTATTGAAGGTGTATTTTTCTCTGGATCAT 212075
Query 101961 TCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATG 102020
| || |||| || ||| | || || || ||| | |||||||| | |||| || ||||
Sbjct 212074 TTGCTGCCATATTTTGGTTGAAAAAGAGAGGTTTAATGCCTGGTTTAACCTTTTCTAATG 212015
Query 102021 AGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCAT-------GCTG--T 102071
| | || | | | || |||||||| ||| || |||| ||| | ||| |
Sbjct 212014 AACTTATCTGTCGAGATGAAGGTCTACATACAGATTTTGGATGTTTATTATTCGCTCACT 211955
Query 102072 TGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTCTTGAAA-TTGTCACTGAA 102130
|| |||| | ||| ||| || | | || |||| |||||||||||
Sbjct 211954 TGCAAAAT----------AAACCTGATCCAGCTATTG---TCGAGAAAATTGTCACTGAA 211908
Query 102131 GCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATG 102190
|| || |||||| |||||| | || | | || ||||| |||| | || |||
Sbjct 211907 GCTGTTGTGATTGAAAAAGAATACTTTACCGAGGCTCTTCCTGTCTCATTACTTGGTATG 211848
Query 102191 AACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATG 102250
|| ||| | |||||| | || |||||||||| ||| || |||| | | | |||| ||
Sbjct 211847 AATTGCGACTTGATGTGTCAATACATTGAATATGTTGCTGATAGATTGCTCGTTGCTTTG 211788
Query 102251 GGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTC 102310
||| ||||| ||| ||| ||| || || ||| || ||||| |||||||| ||
Sbjct 211787 GGAAATAAAAAGGTTTATGATGCTACAAATCCTTTCGACTTTATGGAAAATATTTCTCTT 211728
Query 102311 GAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
| |||||| || || |||||||||||||| | || ||||||
Sbjct 211727 GTTGGTAAGACTAATTTCTTTGAAAAGAGAGTTTCAGATTATCAA 211683
Score = 123 bits (136), Expect = 5e-23
Identities = 340/515 (66%), Gaps = 22/515 (4%)
Strand=Plus/Plus
Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGAT----GCAAAGCAATAACGATTTGGC 101907
|| |||||||||| | |||||| | | ||||| | ||| || | ||||| |
Sbjct 578091 ATTAAGAAGAAGGCAGATTGGGCTTTAAGATGGATTAGTGATAAGGAAGCATTATTTG-C 578149
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
|||| ||||||| || ||||| |||||||| || || || |||| | ||||||||
Sbjct 578150 TGAACGTCTTGTTGCTTTCGCTGCTGTTGAAGGTATTTTTTTCTCTGGTTCTTTCGCATC 578209
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
||||||||| | || || || ||| | |||| || || || | || ||||| || ||
Sbjct 578210 TATTTTCTGGTTAAAAAAGAGAGGTTTAATGCCAGGCCTTACTTTTTCTAATGAATTGAT 578269
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087
| | | || ||||||||||| || ||||| ||| | | || | ||| |
Sbjct 578270 CTGTCGTGATGAAGGTCTTCACACTGATTTTGCTTGCTTATTATTTTCCCA---TTTGGA 578326
Query 102088 TGAT--ACCCCATCAAGAGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGTCCGAATT 102142
|| |||| ||| || ||| ||||| || | || || || || |||
Sbjct 578327 AAATAGACCCGATC-----CAATTATTGTTGAAAAGATAATTACAGAGGCTGTAACTATT 578381
Query 102143 GAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTG 102202
|| | |||| | |||| | | || || | |||| | || ||||| ||||| |||
Sbjct 578382 GAGAAGGAATACTTTACAGATGCTCTTCCAGCCTCATTACTTGGTATGAATTGCAATTTG 578441
Query 102203 ATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAA 102260
||| | || || |||||| ||| || ||| || || |||| | || || || |
Sbjct 578442 ATGTGTCAATATGTTGAATATGTTGCCGATCGTCTTTTAGTTGCTCTAGGTAACAAG--A 578499
Query 102261 AGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGA 102320
|| || |||||||| || || || |||||||| |||||||| | | |||||
Sbjct 578500 AGATTTACAATGTTACTAATCCATTTGACTTCATGGAGAATATTTCATTAGCTGGTAAGA 578559
Query 102321 CCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
| |||||||| || |||||||| | || ||||||
Sbjct 578560 CAAACTTTTTCGAGAAGAGAGTTTCTGATTATCAA 578594
>seq21
Length=453462
Score = 118 bits (130), Expect = 2e-21
Identities = 311/474 (66%), Gaps = 17/474 (4%)
Strand=Plus/Plus
Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451
|||||| ||| |||| || ||||| || ||||||||| | |||||||||||| |||||
Sbjct 131117 AGAGGGTGATCTGGGTCCTGTATATGGCTTCCAATGGAGGCATTTTGGTGCTAAATATAC 131176
Query 35452 TACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGAC 35511
| ||| | | |||||||| || ||||| ||||||| || || | | | | |
Sbjct 131177 AAATTGTGATGCGGATTATACAGGTCAGGGTGTTGATCAGTTAGCGGAAGTTATTTATAA 131236
Query 35512 CCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCT 35571
| | | | || ||| ||||| |||| || ||| | | || ||||||||| |||| |
Sbjct 131237 ATTAAAAAATAACCCATATGATCGAAGAATCATTTTATCTGCCTGGAATCCTGCGGATTT 131296
Query 35572 TCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT------------ 35619
| |||||||| || ||||| || ||| ||| |||||||||||
Sbjct 131297 TTCAAAAATGGCTCTGCCACCATGTCATATGTTTGCACAATTTTATGTTAACTTTCCAAA 131356
Query 35620 GGCT---AATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGG 35676
|| | || ||| | || || ||||| || || | ||| | || || ||
Sbjct 131357 GGATAAGAAACCAGAGCTTTCTTGTGTTTTGTACCAAAGATCTTGCGATATGGGTTTAGG 131416
Query 35677 CGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGC-CAGTATGGTGG 35735
|| ||||| || ||||||||||| ||||| | || | |||| || || | || |
Sbjct 131417 AGTCCCCTTTAACATTGCATCATATGCTCTTTTAACAAAAATGATTGCTCATGTTTGT-G 131475
Query 35736 GTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCACA 35795
| | | || || ||||| | ||||||||| || |||||| ||||| | ||
Sbjct 131476 ATATGGAGTGTGGTGATTTTATTCACACTCTTGGAGATGCACACGTTTATTTAAATCATG 131535
Query 35796 TTGAGGTGTTAAAGAAGCAGTTGTGCCGCGTCCCTAGACCATTCCCTAAGTTGA 35849
|||| | |||||| | ||| | | || || || || ||| || |||||||
Sbjct 131536 TTGATGCTTTAAAGGAACAGATATCTCGAGTGCCAAGGGAATTTCCAAAGTTGA 131589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989582275649880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |