Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq14 316 2e-81 >seq14 Length=670130 Score = 316 bits (350), Expect = 2e-81 Identities = 593/866 (68%), Gaps = 9/866 (1%) Strand=Plus/Minus Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628 ||||| || ||||||||| ||| |||||| || || || ||||| || ||||| | Sbjct 578608 ATAACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCT 578549 Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACACT-TTATCACAACC 13687 | ||| ||||| ||||| || ||||||||||| | | |||| | | || | ||| Sbjct 578548 AATGAAATATTCTCCATGAAGTCAAATGGATT-AGTAACATTGTAAATCTTCTTGTTACC 578490 Query 13688 TAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13747 ||| | | || | | ||| |||| | | |||| ||||||| |||| |||| ||||| Sbjct 578489 TAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATT 578430 Query 13748 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807 |||||| | || | | |||| || || || |||| || || |||| ||||| Sbjct 578429 CATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGC 578370 Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAA 13865 |||| | || || || || ||| ||| || | | |||||| | ||| ||| Sbjct 578369 CTCTGTAATTATCTTTTCAACAATA--ATTGGATCGGGTCTATTTTCCAAATGGGAAAAT 578312 Query 13866 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 13925 | ||| || ||||||||| ||||| || ||||| | || || | ||| || ||||| Sbjct 578311 AATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAA 578252 Query 13926 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAA 13985 || | |||||||| || |||| ||||||||||| || || | || || || || || Sbjct 578251 GTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAG 578192 Query 13986 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTG 14045 || || || || ||||| ||||| || || | | ||||| |||| |||||| || Sbjct 578191 AAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTA 578132 Query 14046 TTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14105 | |||||| || |||||| || | || || |||||| || | |||||||| Sbjct 578131 TCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATA 578072 Query 14106 GCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165 ||||| |||||| |||| |||||||| | | ||| ||||| ||||| | || | Sbjct 578071 GCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGTGAA 578012 Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225 || | ||||||||||| |||||||| || || |||||||||||||| ||||||| Sbjct 578011 TATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTTCT 577952 Query 14226 GACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 | ||| || || | |||| |||| | |||||||| ||||| |||||||| | Sbjct 577951 GGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAA 577892 Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAG---TTTT 14342 || || ||||| || || | | | |||||| | |||| || || || || ||| Sbjct 577891 GCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTATTT 577832 Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402 | |||||| | ||| ||| | ||| | ||| ||| | ||||| ||| || || Sbjct 577831 TCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCTTCA 577772 Query 14403 GCTTTTTTATACATTACCCATATTTC 14428 || |||||||||||| ||| || || Sbjct 577771 GCCTTTTTATACATTTGCCAGATCTC 577746 Score = 306 bits (338), Expect = 4e-78 Identities = 628/924 (68%), Gaps = 11/924 (1%) Strand=Plus/Plus Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628 ||||| || | |||||||| || |||||| ||||||||||| ||||| ||||| | Sbjct 211669 ATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACA 211728 Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGA--CATAAACACTTTATCACAAC 13686 || || |||||||||||||| || || |||||| | | ||||||| |||| | | | Sbjct 211729 AGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAAC-CTTTTT-ATTTC 211786 Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746 | | | | || ||||||||||||| | | ||||| |||||| |||| || || |||| Sbjct 211787 CCAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAAT 211846 Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806 ||||||| | || | ||||||| | ||| || |||||||||| || |||| Sbjct 211847 TCATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAG 211906 Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13866 | || | | ||| | | ||| | | ||| || || | || || | Sbjct 211907 CTTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATA 211966 Query 13867 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13926 |||||| ||||||| ||| || || ||||||| || |||||||| || ||||| | Sbjct 211967 ATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGG 212026 Query 13927 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAA 13986 |||| || ||||| || |||| ||||| ||||||||||| ||||||||||| || || | Sbjct 212027 TTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGA 212086 Query 13987 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14046 | |||| || |||| | ||||| || | ||||||||| ||||| |||||| | | Sbjct 212087 AAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCG- 212145 Query 14047 TCGAT-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14105 ||| | |||||||| || ||| |||| || | ||| ||| | || | |||| Sbjct 212146 TCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATT 212205 Query 14106 GCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165 ||||||| | | | || || || ||| | |||||| ||||| | ||| Sbjct 212206 GCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAG 212265 Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225 || ||||||| ||||| ||||| | ||||| || ||||| || | | | ||||| Sbjct 212266 TAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCA 212325 Query 14226 GACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 | ||| || || | |||| | || | |||||||||||||| | ||||||| Sbjct 212326 GGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGAT 212385 Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTT---TT 14342 ||||||||||| ||||||| || |||||| || ||| | | ||| | | | Sbjct 212386 GCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGTG 212445 Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402 | ||| || | || |||||||| |||||| | ||| || ||||| || ||| | Sbjct 212446 TCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTCG 212505 Query 14403 GCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT-CGA 14461 || || |||||| ||| ||||| |||| || ||||| | |||||||| || Sbjct 212506 TGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATCTGCGT 212565 Query 14462 AGATGTTTCTTTAAGAATTGGTTC 14485 | |||| || |||| |||||| Sbjct 212566 TTGT-TTTCCTTGAGAAGTGGTTC 212588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727184462400