Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq14 316 2e-81
>seq14
Length=670130
Score = 316 bits (350), Expect = 2e-81
Identities = 593/866 (68%), Gaps = 9/866 (1%)
Strand=Plus/Minus
Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628
||||| || ||||||||| ||| |||||| || || || ||||| || ||||| |
Sbjct 578608 ATAACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCT 578549
Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACACT-TTATCACAACC 13687
| ||| ||||| ||||| || ||||||||||| | | |||| | | || | |||
Sbjct 578548 AATGAAATATTCTCCATGAAGTCAAATGGATT-AGTAACATTGTAAATCTTCTTGTTACC 578490
Query 13688 TAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13747
||| | | || | | ||| |||| | | |||| ||||||| |||| |||| |||||
Sbjct 578489 TAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATT 578430
Query 13748 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807
|||||| | || | | |||| || || || |||| || || |||| |||||
Sbjct 578429 CATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGC 578370
Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAA 13865
|||| | || || || || ||| ||| || | | |||||| | ||| |||
Sbjct 578369 CTCTGTAATTATCTTTTCAACAATA--ATTGGATCGGGTCTATTTTCCAAATGGGAAAAT 578312
Query 13866 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 13925
| ||| || ||||||||| ||||| || ||||| | || || | ||| || |||||
Sbjct 578311 AATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAA 578252
Query 13926 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAA 13985
|| | |||||||| || |||| ||||||||||| || || | || || || || ||
Sbjct 578251 GTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAG 578192
Query 13986 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTG 14045
|| || || || ||||| ||||| || || | | ||||| |||| |||||| ||
Sbjct 578191 AAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTA 578132
Query 14046 TTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14105
| |||||| || |||||| || | || || |||||| || | ||||||||
Sbjct 578131 TCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATA 578072
Query 14106 GCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165
||||| |||||| |||| |||||||| | | ||| ||||| ||||| | || |
Sbjct 578071 GCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGTGAA 578012
Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225
|| | ||||||||||| |||||||| || || |||||||||||||| |||||||
Sbjct 578011 TATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTTCT 577952
Query 14226 GACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285
| ||| || || | |||| |||| | |||||||| ||||| |||||||| |
Sbjct 577951 GGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAA 577892
Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAG---TTTT 14342
|| || ||||| || || | | | |||||| | |||| || || || || |||
Sbjct 577891 GCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTATTT 577832
Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402
| |||||| | ||| ||| | ||| | ||| ||| | ||||| ||| || ||
Sbjct 577831 TCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCTTCA 577772
Query 14403 GCTTTTTTATACATTACCCATATTTC 14428
|| |||||||||||| ||| || ||
Sbjct 577771 GCCTTTTTATACATTTGCCAGATCTC 577746
Score = 306 bits (338), Expect = 4e-78
Identities = 628/924 (68%), Gaps = 11/924 (1%)
Strand=Plus/Plus
Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628
||||| || | |||||||| || |||||| ||||||||||| ||||| ||||| |
Sbjct 211669 ATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACA 211728
Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGA--CATAAACACTTTATCACAAC 13686
|| || |||||||||||||| || || |||||| | | ||||||| |||| | | |
Sbjct 211729 AGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAAC-CTTTTT-ATTTC 211786
Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746
| | | | || ||||||||||||| | | ||||| |||||| |||| || || ||||
Sbjct 211787 CCAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAAT 211846
Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806
||||||| | || | ||||||| | ||| || |||||||||| || ||||
Sbjct 211847 TCATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAG 211906
Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13866
| || | | ||| | | ||| | | ||| || || | || || |
Sbjct 211907 CTTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATA 211966
Query 13867 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13926
|||||| ||||||| ||| || || ||||||| || |||||||| || ||||| |
Sbjct 211967 ATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGG 212026
Query 13927 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAA 13986
|||| || ||||| || |||| ||||| ||||||||||| ||||||||||| || || |
Sbjct 212027 TTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGA 212086
Query 13987 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14046
| |||| || |||| | ||||| || | ||||||||| ||||| |||||| | |
Sbjct 212087 AAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCG- 212145
Query 14047 TCGAT-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14105
||| | |||||||| || ||| |||| || | ||| ||| | || | ||||
Sbjct 212146 TCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATT 212205
Query 14106 GCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165
||||||| | | | || || || ||| | |||||| ||||| | |||
Sbjct 212206 GCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGAG 212265
Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225
|| ||||||| ||||| ||||| | ||||| || ||||| || | | | |||||
Sbjct 212266 TAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTCA 212325
Query 14226 GACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285
| ||| || || | |||| | || | |||||||||||||| | |||||||
Sbjct 212326 GGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGAT 212385
Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTT---TT 14342
||||||||||| ||||||| || |||||| || ||| | | ||| | | |
Sbjct 212386 GCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGTG 212445
Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402
| ||| || | || |||||||| |||||| | ||| || ||||| || ||| |
Sbjct 212446 TCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTCG 212505
Query 14403 GCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT-CGA 14461
|| || |||||| ||| ||||| |||| || ||||| | |||||||| ||
Sbjct 212506 TGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATCTGCGT 212565
Query 14462 AGATGTTTCTTTAAGAATTGGTTC 14485
| |||| || |||| ||||||
Sbjct 212566 TTGT-TTTCCTTGAGAAGTGGTTC 212588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727184462400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |