Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq14 324 1e-83 >seq14 Length=670130 Score = 324 bits (358), Expect = 1e-83 Identities = 597/869 (69%), Gaps = 15/869 (2%) Strand=Plus/Minus Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416 ||||| || ||||||||| ||| |||||| || || |||||||| || ||||| | Sbjct 578608 ATAACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCT 578549 Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACT-TTATCACAACC 13475 | ||| ||||| ||||| || || |||||||| || |||| | | || | ||| Sbjct 578548 AATGAAATATTCTCCATGAAGTCAAATGGATTAGTA-ACATTGTAAATCTTCTTGTTACC 578490 Query 13476 TAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13535 ||| | | ||| | | ||| |||| | | |||| ||||||| |||| |||| ||||| Sbjct 578489 TAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATT 578430 Query 13536 CATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGC 13595 |||||| | || | | |||| || || || |||| || || |||| ||||| Sbjct 578429 CATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGC 578370 Query 13596 CTCGTTTATAATAATCTT---AATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTA 13650 ||| | |||| ||||| || ||| ||| || | | |||||| | ||| | Sbjct 578369 CTC---TGTAATTATCTTTTCAACAATA--ATTGGATCGGGTCTATTTTCCAAATGGGAA 578315 Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710 || | ||| || ||||||||| ||||| || ||||| | || || | ||| || ||| Sbjct 578314 AATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAA 578255 Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770 || || | |||||||| || |||| ||||||||||| || || | ||||| || || Sbjct 578254 AAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCA 578195 Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830 || || || || || ||||| ||||| || || | || ||||| |||| |||||| Sbjct 578194 GAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCC 578135 Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890 || | |||||| || |||||| || | || || |||||| || | |||| Sbjct 578134 TTATCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCA 578075 Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 13950 || |||||||||||| ||| |||||||| | | ||| ||||| ||||| | || Sbjct 578074 ATAGCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGT 578015 Query 13951 CTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCT 14010 ||| | ||||||||||| ||||| || || || ||||||||||| || ||||| Sbjct 578014 GAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCT 577955 Query 14011 TCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCA 14070 |||| ||| ||||| | |||| |||| | || ||||| |||||||||||||| Sbjct 577954 TCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCT 577895 Query 14071 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAG---T 14127 ||| || ||||| || || | | | |||||| | |||| || || || || Sbjct 577894 GAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTA 577835 Query 14128 TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCG 14187 |||| |||||| | | ||| ||| | ||| | ||| ||| | ||||| ||| || Sbjct 577834 TTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCT 577775 Query 14188 ACAGCTTTTTTATACATTACCCATATTTC 14216 |||| |||||||||||| ||| || || Sbjct 577774 TCAGCCTTTTTATACATTTGCCAGATCTC 577746 Score = 307 bits (340), Expect = 1e-78 Identities = 610/897 (68%), Gaps = 11/897 (1%) Strand=Plus/Plus Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416 ||||| || | |||||||| || |||||| |||||||| || ||||| ||||| | Sbjct 211669 ATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACA 211728 Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGA--CATAAACACTTTATCACAAC 13474 || || |||||||||||||| ||||| |||||||| | ||||||| |||| | | | Sbjct 211729 AGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAAC-CTTTTT-ATTTC 211786 Query 13475 CTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13534 | | | | | ||||||||||||| | | ||||| |||||| |||| || || |||| Sbjct 211787 CCAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAAT 211846 Query 13535 TCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAG 13594 ||||||| | || | ||||||| | || || |||||||||| || |||| Sbjct 211847 TCATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAG 211906 Query 13595 CCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13654 | || | | ||| ||| | ||| | | ||| || || | || || | Sbjct 211907 CTTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATA 211966 Query 13655 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13714 |||||| ||||||| ||| || || ||||||| || |||||||| || ||||| | Sbjct 211967 ATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGG 212026 Query 13715 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAA 13774 |||| || ||||| || |||| ||||| ||||||||||| ||||| |||||||| || | Sbjct 212027 TTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGA 212086 Query 13775 AGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT 13834 | |||| || |||| | ||||| || | || |||||| ||||| |||||| | || Sbjct 212087 AAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCGT 212146 Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTG 13894 |||||||| || ||| |||| || | ||| ||| | || | | |||| Sbjct 212147 CGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTG 212206 Query 13895 CATT--GAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 13952 |||| ||| ||| || || || ||| | |||||| ||||| | ||| Sbjct 212207 CATTAAGAAGAAA--GTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGA 212264 Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012 || ||||||| ||||| |||||| | ||||| || ||||| |||| | | ||||| Sbjct 212265 GTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTC 212324 Query 14013 TGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACT 14072 | ||| ||||| | |||| | || | || ||||||||||||| ||||||| Sbjct 212325 AGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGA 212384 Query 14073 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTT---T 14129 ||||||||||| ||||||| || |||||| || ||| | | ||| | | | Sbjct 212385 TGCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGT 212444 Query 14130 TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14189 | ||| || | || |||||||| |||||| | ||| || ||||| || ||| | Sbjct 212445 GTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTC 212504 Query 14190 AGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14246 || || |||||| ||| ||||| |||| || ||||| | |||||||| Sbjct 212505 GTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATCT 212561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587986399040