Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq14 324 1e-83
>seq14
Length=670130
Score = 324 bits (358), Expect = 1e-83
Identities = 597/869 (69%), Gaps = 15/869 (2%)
Strand=Plus/Minus
Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416
||||| || ||||||||| ||| |||||| || || |||||||| || ||||| |
Sbjct 578608 ATAACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCT 578549
Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACT-TTATCACAACC 13475
| ||| ||||| ||||| || || |||||||| || |||| | | || | |||
Sbjct 578548 AATGAAATATTCTCCATGAAGTCAAATGGATTAGTA-ACATTGTAAATCTTCTTGTTACC 578490
Query 13476 TAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13535
||| | | ||| | | ||| |||| | | |||| ||||||| |||| |||| |||||
Sbjct 578489 TAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAATT 578430
Query 13536 CATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGC 13595
|||||| | || | | |||| || || || |||| || || |||| |||||
Sbjct 578429 CATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAGC 578370
Query 13596 CTCGTTTATAATAATCTT---AATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTA 13650
||| | |||| ||||| || ||| ||| || | | |||||| | ||| |
Sbjct 578369 CTC---TGTAATTATCTTTTCAACAATA--ATTGGATCGGGTCTATTTTCCAAATGGGAA 578315
Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710
|| | ||| || ||||||||| ||||| || ||||| | || || | ||| || |||
Sbjct 578314 AATAATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAA 578255
Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770
|| || | |||||||| || |||| ||||||||||| || || | ||||| || ||
Sbjct 578254 AAAGTAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCA 578195
Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830
|| || || || || ||||| ||||| || || | || ||||| |||| ||||||
Sbjct 578194 GAGAAAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCC 578135
Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890
|| | |||||| || |||||| || | || || |||||| || | ||||
Sbjct 578134 TTATCACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCA 578075
Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 13950
|| |||||||||||| ||| |||||||| | | ||| ||||| ||||| | ||
Sbjct 578074 ATAGCATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGT 578015
Query 13951 CTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCT 14010
||| | ||||||||||| ||||| || || || ||||||||||| || |||||
Sbjct 578014 GAATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCT 577955
Query 14011 TCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCA 14070
|||| ||| ||||| | |||| |||| | || ||||| ||||||||||||||
Sbjct 577954 TCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCT 577895
Query 14071 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAG---T 14127
||| || ||||| || || | | | |||||| | |||| || || || ||
Sbjct 577894 GAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTA 577835
Query 14128 TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCG 14187
|||| |||||| | | ||| ||| | ||| | ||| ||| | ||||| ||| ||
Sbjct 577834 TTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCT 577775
Query 14188 ACAGCTTTTTTATACATTACCCATATTTC 14216
|||| |||||||||||| ||| || ||
Sbjct 577774 TCAGCCTTTTTATACATTTGCCAGATCTC 577746
Score = 307 bits (340), Expect = 1e-78
Identities = 610/897 (68%), Gaps = 11/897 (1%)
Strand=Plus/Plus
Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416
||||| || | |||||||| || |||||| |||||||| || ||||| ||||| |
Sbjct 211669 ATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAACA 211728
Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGA--CATAAACACTTTATCACAAC 13474
|| || |||||||||||||| ||||| |||||||| | ||||||| |||| | | |
Sbjct 211729 AGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAAC-CTTTTT-ATTTC 211786
Query 13475 CTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13534
| | | | | ||||||||||||| | | ||||| |||||| |||| || || ||||
Sbjct 211787 CCAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAAT 211846
Query 13535 TCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAG 13594
||||||| | || | ||||||| | || || |||||||||| || ||||
Sbjct 211847 TCATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAG 211906
Query 13595 CCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 13654
| || | | ||| ||| | ||| | | ||| || || | || || |
Sbjct 211907 CTTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAGTGAGCGAATA 211966
Query 13655 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13714
|||||| ||||||| ||| || || ||||||| || |||||||| || ||||| |
Sbjct 211967 ATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAAGG 212026
Query 13715 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAA 13774
|||| || ||||| || |||| ||||| ||||||||||| ||||| |||||||| || |
Sbjct 212027 TTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGAGA 212086
Query 13775 AGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT 13834
| |||| || |||| | ||||| || | || |||||| ||||| |||||| | ||
Sbjct 212087 AAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATCGT 212146
Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTG 13894
|||||||| || ||| |||| || | ||| ||| | || | | ||||
Sbjct 212147 CGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGACAATTG 212206
Query 13895 CATT--GAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 13952
|||| ||| ||| || || || ||| | |||||| ||||| | |||
Sbjct 212207 CATTAAGAAGAAA--GTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAGA 212264
Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012
|| ||||||| ||||| |||||| | ||||| || ||||| |||| | | |||||
Sbjct 212265 GTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGCTTC 212324
Query 14013 TGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACT 14072
| ||| ||||| | |||| | || | || ||||||||||||| |||||||
Sbjct 212325 AGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATCAGA 212384
Query 14073 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTT---T 14129
||||||||||| ||||||| || |||||| || ||| | | ||| | | |
Sbjct 212385 TGCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACTTAGT 212444
Query 14130 TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14189
| ||| || | || |||||||| |||||| | ||| || ||||| || ||| |
Sbjct 212445 GTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAGCCTC 212504
Query 14190 AGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14246
|| || |||||| ||| ||||| |||| || ||||| | ||||||||
Sbjct 212505 GTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATCT 212561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478587986399040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |