Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq21 91.5 2e-13 >seq21 Length=453462 Score = 91.5 bits (100), Expect = 2e-13 Identities = 351/546 (64%), Gaps = 19/546 (3%) Strand=Plus/Plus Query 70063 AGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGT 70122 |||||| |||||||| || || || || ||||| |||||||| | || | || ||| Sbjct 131117 AGAGGGTGATCTGGGTCCTGTATATGGCTTCCAATGGAGGCATTTTGGTGCTAAATATAC 131176 Query 70123 AGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATT-GCAGACAATCATTGACA 70181 | | || || | || ||| | ||||||||||||||||| || || || | | ||| | | Sbjct 131177 AAATTGTGATGCGGATTATACAGGTCAGGGTGTTGATCAGTTAGCGGA-AGTTATTTATA 131235 Query 70182 CTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATT 70241 | || | || ||| ||| | || ||| | | | | ||||||||||| |||| Sbjct 131236 AATTAAAAAATAACCCATATGATCGAAGAATCATTTTATCTGCCTGGAATCCTGCGGATT 131295 Query 70242 TGCACCAAATGGCACTACCACCGTGTCA-CTGTTTGGCTCAGTTTT------ACT---CG 70291 | ||||||| || ||||| ||||| ||||| || || |||| ||| | Sbjct 131296 TTTCAAAAATGGCTCTGCCACCATGTCATATGTTT-GCACAATTTTATGTTAACTTTCCA 131354 Query 70292 TACGATGGCAAA------TTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTC 70345 | ||| ||| | || || | |||| || || | ||| ||||| | Sbjct 131355 AAGGATAAGAAACCAGAGCTTTCTTGTGTTTTGTACCAAAGATCTTGCGATATGGGTTTA 131414 Query 70346 GGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACC 70405 || || ||||||||||||||| ||| || | || || | ||||||||||| || Sbjct 131415 GGAGTCCCCTTTAACATTGCATCATATGCTCTTTTAACAAAAATGATTGCTCATGTTTGT 131474 Query 70406 GGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCAC 70465 | || | || || | ||||| |||| || || ||||| ||||||||||| Sbjct 131475 GATATGGAGTGTGGTGATTTTATTCACACTCTTGGAGATGCACACGTTTATTTAAATCAT 131534 Query 70466 ATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTT 70525 | || | ||||||| || | || | ||| || ||||| ||| || | || Sbjct 131535 GTTGATGCTTTAAAGGAACAGATATCTCGAGTGCCAAGGGAATTTCCAAAGTTGAATATT 131594 Query 70526 GCTCGTAAAGTTGAAAATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTAC 70585 | | ||||| | ||||| || ||| || || || |||||| | | || |||| Sbjct 131595 ACAAGAAAAGTAGCTAATATAGATGATTTCAAATATGAGGATTTTGTTGTGTCAGATTAC 131654 Query 70586 GATCCA 70591 ||||| Sbjct 131655 AATCCA 131660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057940199360