Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq8 91.5 1e-13
seq21 86.0 5e-12
seq5 86.0 5e-12
>seq8
Length=1087023
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| ||| ||||| |||||||||| || ||||| ||||| |||||||| ||
Sbjct 676686 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 676745
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| || ||||| |||||||| || ||| | || | || ||||| || ||
Sbjct 676746 AAGGTACGTCCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGAGGA 676805
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| ||||||| || || | | ||| || || | |||
Sbjct 676806 ATTCCTTCCTTGTCTTGAATTTTTGACTTAACATTGTCAATAGTGTCAGAGGATTCAACC 676865
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
|| | ||||||||||| |||||||| |||||||| || || ||||||
Sbjct 676866 TCGAGAGTAATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCATT 676913
>seq21
Length=453462
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| ||| || || ||||| |||| ||||| || ||||| |||||||||||
Sbjct 371750 CCACCTCTTAATCTTAAAACCAAGTGTAAGGTAGACTCCTTTTGGATGTTGTAATCAGAT 371691
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| | |||||| | |||||| || ||| |||| | | |||||||| |||
Sbjct 371690 AAAGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGGGGA 371631
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| || ||| ||| || | | | | ||| | | |||
Sbjct 371630 ATTCCTTCCTTGTCTTGGATCTTTGATTTAACATTATCGATTGTATCACTGGATTCGACC 371571
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| | || |||||||| || || | ||| ||||||||||| |||||
Sbjct 371570 TCAAGAGTGATGGTTTTACCCGTTAGCGTCTTGACAAAAATCTGCAT 371524
>seq5
Length=1301127
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| ||| ||||| |||||||||| || ||||| ||||| |||||||||||
Sbjct 1173646 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCCTTTTGGATGTTGTAATCAGAT 1173705
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| |||||| ||||| || || ||| | || | | ||||| || ||
Sbjct 1173706 AAAGTACGTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGG 1173765
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| || ||| || || | | ||| || |||| | ||
Sbjct 1173766 ATTCCTTCCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACC 1173825
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|| | |||||| || || ||||| | |||||||||||||| ||||| ||
Sbjct 1173826 TCGAGGGTAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTT 1173875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419586504534216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |