Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 2e-12 >seq5 Length=1301127 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 48509 AACCTTAACACTAAATG--AAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC 48566 || || || || ||||| |||| || | |||||||| ||||||||||||| || | Sbjct 1173655 AATCTCAAAACCAAATGTAAAGT-TGAT-TCCTTTTGGATGTTGTAATCAGATAAAGTAC 1173712 Query 48567 GCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTT 48626 | | || || | |||||||| | | |||||||| || || || || | | || Sbjct 1173713 GTCCATCTTCTAATTGCTTACCAGCAAAGATTAAACGTTGTTGGTCTGGAGGGATTCCTT 1173772 Query 48627 CCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTG 48686 |||||||| || || ||| | | | || ||||||| ||||| ||||| | Sbjct 1173773 CCTTGTCCTGGATCTTTGACTTAACATTGTCAATAGTATCGGATGACTCTACCTCGAGGG 1173832 Query 48687 TTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 | || || |||||||| || ||||| ||||||||||||||| || Sbjct 1173833 TAATAGTCTTACCGGTAAGGGTTTTGACAAAAATCTGCATCTTG 1173876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250501776136