Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq4 246 4e-60
seq1 89.7 6e-13
>seq4
Length=1434447
Score = 246 bits (272), Expect = 4e-60
Identities = 485/707 (69%), Gaps = 28/707 (4%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| ||||| | ||||| ||||| ||||||| | ||||| ||| ||
Sbjct 526017 AAATTTGAAGATATGGGTATTGGTGGTTTAGATGAAGAATTTAGTGCCATTTTTAGAAGA 525958
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACATAT 164516
|| ||||| |||| | |||| | | | || || ||||||| || | | ||| |
Sbjct 525957 GCTTTTGCAAGTAGAACT-TTCCCACCAGGTATTATTGAAAAATTGGGAGTTCATCATGT 525899
Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576
||||| |||||||| ||||| || || || ||||| |||||||| || || ||
Sbjct 525898 TAAAGGTATTTTATTGCATGGTCCCCCAGGAACAGGTAAGACATTAATTGCAAGACAAAT 525839
Query 164577 TGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633
|| | || | |||||| | || || |||||||| |||||||||||| | ||
Sbjct 525838 TGGTAAAA-TGTTAAATGCTAGAGAGCCA--AAAATTGTAAATGGTCCTGAAATTTTATC 525782
Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693
|||||||| ||| ||||||| ||| ||||||| || ||| | || ||||||| ||
Sbjct 525781 GAAATATGTTGGTTCTTCAGAAGAAAATATTAGAAATTTATTTAAAGATGCTGAAGCTGA 525722
Query 164694 ACA-AAAGAAAGCAGGTTTAG---CTAGTAAATTACATGTTATTGTTTTTGATGAGATAG 164749
| | |||| || |||| || || || ||||| ||||| | |||||||| |||
Sbjct 525721 ATATAAAGCAAA-AGGTGAAGAATCTGGT---TTACACATTATTATATTTGATGAATTAG 525666
Query 164750 ATGCTCTTTGCAAAAAACGTGGTGATA-ATATTATTCA-----TGATGCAG------TGG 164797
|| | ||| ||| || | ||| || | | || | || || || | |
Sbjct 525665 ATTCAGTTTTTAAACAAAGGGGTAGTAGAGGTGATGGAACAGGTGTTGGAGATAATGTTG 525606
Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857
| ||||| || | | ||||| |||||||| || ||||||||||||||| || | |
Sbjct 525605 TCAATCAATTATTAGCAAAAATGGATGGTGTTGATCAATTAAATAATATTTTAGTTATTG 525546
Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917
||||||| || ||| ||||||||||||||||| |||||||| |||||||| || |||
Sbjct 525545 GTATGACAAATCGAAGAGATTTAATTGATGATGCCTTATTACGTCCTGGTCGTTTTGAAA 525486
Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATG 164977
|| |||| ||||| ||||| || || | ||||| ||||||||||| || ||||
Sbjct 525485 TGCAAATTGAAATTTCTTTACCTGATGAACATGGACGTTTTCAAATTTTAGAAATTCAAA 525426
Query 164978 TGGCTAAAATGAAATCCTGTGATATATTATCTCCCGATGTAGATTTAAATAAAATAGCTG 165037
||||||| | | |||| | ||||| |||||||| || |||||
Sbjct 525425 CTAAAAAAATGAGAGAGTCAAATATGGTTGAAAAAGATGTTGATTTAAAAGAATTAGCTA 525366
Query 165038 CCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGTAAGA 165084
| |||||||||| ||||||||| | || || |||||||||
Sbjct 525365 CTTTGACTAAAAATTTCTCAGGTGCTGAAATTGAAGGTTTAGTAAGA 525319
>seq1
Length=2214157
Score = 89.7 bits (98), Expect = 6e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 19343 AGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGC 19402
||| || | ||||| ||| |||| |||||||||||||||||| | | |||||| ||
Sbjct 1732749 AGAACTACAAAAATTCCTCAAATTGGTGATAAGTTTGCTTCTCGTCACGGTCAAAAGGGT 1732690
Query 19403 ACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCG 19462
|| |||| ||| ||| | || |||||| | || ||| || || ||||| ||
Sbjct 1732689 ACTATTGGTGTGACATATAGACATGAAGATGTTCCATTTTCTGCTGAAGGTATCTGCCCT 1732630
Query 19463 GATCTTATTATTAACCCACATGCTTTTCC 19491
||| | |||||||| ||||||||| ||||
Sbjct 1732629 GATATCATTATTAATCCACATGCTATTCC 1732601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595870987017600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |