Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq4 246 4e-60 seq1 89.7 6e-13 >seq4 Length=1434447 Score = 246 bits (272), Expect = 4e-60 Identities = 485/707 (69%), Gaps = 28/707 (4%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| ||||| | ||||| ||||| ||||||| | ||||| ||| || Sbjct 526017 AAATTTGAAGATATGGGTATTGGTGGTTTAGATGAAGAATTTAGTGCCATTTTTAGAAGA 525958 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACATAT 164516 || ||||| |||| | |||| | | | || || ||||||| || | | ||| | Sbjct 525957 GCTTTTGCAAGTAGAACT-TTCCCACCAGGTATTATTGAAAAATTGGGAGTTCATCATGT 525899 Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576 ||||| |||||||| ||||| || || || ||||| |||||||| || || || Sbjct 525898 TAAAGGTATTTTATTGCATGGTCCCCCAGGAACAGGTAAGACATTAATTGCAAGACAAAT 525839 Query 164577 TGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633 || | || | |||||| | || || |||||||| |||||||||||| | || Sbjct 525838 TGGTAAAA-TGTTAAATGCTAGAGAGCCA--AAAATTGTAAATGGTCCTGAAATTTTATC 525782 Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693 |||||||| ||| ||||||| ||| ||||||| || ||| | || ||||||| || Sbjct 525781 GAAATATGTTGGTTCTTCAGAAGAAAATATTAGAAATTTATTTAAAGATGCTGAAGCTGA 525722 Query 164694 ACA-AAAGAAAGCAGGTTTAG---CTAGTAAATTACATGTTATTGTTTTTGATGAGATAG 164749 | | |||| || |||| || || || ||||| ||||| | |||||||| ||| Sbjct 525721 ATATAAAGCAAA-AGGTGAAGAATCTGGT---TTACACATTATTATATTTGATGAATTAG 525666 Query 164750 ATGCTCTTTGCAAAAAACGTGGTGATA-ATATTATTCA-----TGATGCAG------TGG 164797 || | ||| ||| || | ||| || | | || | || || || | | Sbjct 525665 ATTCAGTTTTTAAACAAAGGGGTAGTAGAGGTGATGGAACAGGTGTTGGAGATAATGTTG 525606 Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857 | ||||| || | | ||||| |||||||| || ||||||||||||||| || | | Sbjct 525605 TCAATCAATTATTAGCAAAAATGGATGGTGTTGATCAATTAAATAATATTTTAGTTATTG 525546 Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917 ||||||| || ||| ||||||||||||||||| |||||||| |||||||| || ||| Sbjct 525545 GTATGACAAATCGAAGAGATTTAATTGATGATGCCTTATTACGTCCTGGTCGTTTTGAAA 525486 Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATG 164977 || |||| ||||| ||||| || || | ||||| ||||||||||| || |||| Sbjct 525485 TGCAAATTGAAATTTCTTTACCTGATGAACATGGACGTTTTCAAATTTTAGAAATTCAAA 525426 Query 164978 TGGCTAAAATGAAATCCTGTGATATATTATCTCCCGATGTAGATTTAAATAAAATAGCTG 165037 ||||||| | | |||| | ||||| |||||||| || ||||| Sbjct 525425 CTAAAAAAATGAGAGAGTCAAATATGGTTGAAAAAGATGTTGATTTAAAAGAATTAGCTA 525366 Query 165038 CCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGTAAGA 165084 | |||||||||| ||||||||| | || || ||||||||| Sbjct 525365 CTTTGACTAAAAATTTCTCAGGTGCTGAAATTGAAGGTTTAGTAAGA 525319 >seq1 Length=2214157 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 19343 AGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGC 19402 ||| || | ||||| ||| |||| |||||||||||||||||| | | |||||| || Sbjct 1732749 AGAACTACAAAAATTCCTCAAATTGGTGATAAGTTTGCTTCTCGTCACGGTCAAAAGGGT 1732690 Query 19403 ACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCG 19462 || |||| ||| ||| | || |||||| | || ||| || || ||||| || Sbjct 1732689 ACTATTGGTGTGACATATAGACATGAAGATGTTCCATTTTCTGCTGAAGGTATCTGCCCT 1732630 Query 19463 GATCTTATTATTAACCCACATGCTTTTCC 19491 ||| | |||||||| ||||||||| |||| Sbjct 1732629 GATATCATTATTAATCCACATGCTATTCC 1732601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595870987017600