Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 5e-16 >seq2 Length=1749581 Score = 96.9 bits (106), Expect = 5e-16 Identities = 186/269 (69%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||| ||||| | | ||| ||| || |||||||| ||||| || ||||| |||||||| Sbjct 166571 GCTAAACGTCACAGAAAGAT-TCTCCGTGATAACATTCAAGGTATTACCAAACCAGCTAT 166513 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | || || | ||||| || || ||| | || | | |||||||||| | Sbjct 166512 CAGAAGATTAGCGCGAAGAGGTGGTGTAAAACGTATTTCAGCTCTTATCTATGAAGAAGT 166453 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCA-AGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | | ||||| || ||||| || | | |||||| |||||| | ||||| | Sbjct 166452 TAGAGCCGTTTTAAA-ATCTTTCTTGGAAAATGTTATCAGAGATGCTGTTACTTATACTG 166394 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | ||||| || | ||||||||||| || ||||| | || ||||| || || | |||| Sbjct 166393 AACACGCAAAGAGAAAGACTGTCACTTCATTGGATGTTGTTTATGCTTTAAAGAGACAAG 166334 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | | || ||||||||| | ||| Sbjct 166333 GTAGAACTCTATACGGTTTTGGAGGCTAA 166305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075075654248