Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq14 253 2e-62 >seq14 Length=670130 Score = 253 bits (280), Expect = 2e-62 Identities = 595/902 (66%), Gaps = 9/902 (1%) Strand=Plus/Plus Query 21168 ttGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTC 21227 ||| ||||| || | ||||||||||| |||||| ||||| || ||||| ||||| | Sbjct 211664 TTGCCATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTAC 211723 Query 21228 CTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTAC 21287 | | | || ||| ||||||||| || || |||||| || | | | | || ||| Sbjct 211724 CAACAAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTAT 211783 Query 21288 AACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCAC 21347 |||| | | |||||||| || ||| |||| || ||||||||||| || || | Sbjct 211784 TTCCCAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGC 211843 Query 21348 AATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGA 21407 |||||||||| | ||| ||||||||||| | || || | |||||| || | Sbjct 211844 AATTCATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAA 211903 Query 21408 CGGCTTCA---ACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTT 21464 | |||||| |||||| | | | || || || | ||| || || || Sbjct 211904 CAGCTTCAGTGACAATTTTCTCGACAAT---AGCTGGATCAGGTTTATTTTGCAAGTGAG 211960 Query 21465 TAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAG 21524 || | |||||| ||||||| ||| | ||||||||| | || || | |||||||| Sbjct 211961 CGAATAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAG 212020 Query 21525 AAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTC 21584 |||| |||||||| |||||||| ||||||||||| ||||||||||| | ||||||| || Sbjct 212021 AAAAGGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATC 212080 Query 21585 CTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATT 21644 | || || || | || |||| | ||||| |||||||||||||| || || | || Sbjct 212081 CAGAGAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTT 212140 Query 21645 CTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTAT 21704 | | || |||||||| | ||| | ||||| | ||| ||||| || | Sbjct 212141 CATCGTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGA 212200 Query 21705 CAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764 |||| || || | |||| | ||||||| || | ||| Sbjct 212201 CAATTGCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTA 212260 Query 21765 NACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTG 21824 | || |||||||||||||||||||| || ||||| || || || |||| | | | Sbjct 212261 CAGAGTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGG 212320 Query 21825 CCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884 | || | | ||||||||| | |||| | | | || |||||||| || | |||| Sbjct 212321 CTTCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCAT 212380 Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATT 21944 || || |||||||| ||||||| || ||||| ||| || || || |||| | Sbjct 212381 CAGATGCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACT 212440 Query 21945 ---TTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAG 22001 | | ||| || || ||| || | | ||| | ||| || || ||||| ||| || Sbjct 212441 TAGTGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAG 212500 Query 22002 CAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACC 22061 | ||| || ||||| ||| || ||| |||| | |||||||| || ||||| | Sbjct 212501 CCTCGTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATC 212560 Query 22062 TG 22063 || Sbjct 212561 TG 212562 Score = 230 bits (254), Expect = 2e-55 Identities = 652/995 (66%), Gaps = 38/995 (4%) Strand=Plus/Minus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAA------CATTATCTTCtttttt------tGACA 21173 |||| ||||| |||| |||| ||| |||||||| | || || || || Sbjct 578667 TTTAGAAATCGTCATCAAATGCAAAAGAATCTTCATTATCTGCCTTATTAACACCTGCCA 578608 Query 21174 TAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCA 21233 ||| || ||||||||||||| |||||| || |||||||| |||||||| || | | Sbjct 578607 TAACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTA 578548 Query 21234 ATGATATAGATTCCATAAAATCAAATGGATTT-TCAGATT-TAAATATT-TTATTACAAC 21290 |||| ||| ||||| || ||||||||||| | | ||| ||||| || || |||| Sbjct 578547 ATGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAATCTTCTTGTTAC--- 578491 Query 21291 CCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAAT 21350 | || | ||| | | ||| || ||| |||| | |||||||||||| || | |||| Sbjct 578490 CTAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAAT 578431 Query 21351 TCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGG 21410 ||||||| | ||| | |||||||| | ||| || | || || |||| || | Sbjct 578430 TCATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAG 578371 Query 21411 CTTCAACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACA 21470 | || |||||| ||| | || || | || || || || ||| | Sbjct 578370 CCTCTGTAATTATCTTTTCAACAATAATTGGATCGGGTCTATTTTCCAAATGGGAAAATA 578311 Query 21471 TCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATG 21530 || || ||||||||| || | ||||||||| | || || |||||||||||||| | Sbjct 578310 ATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAG 578251 Query 21531 TTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAA 21590 | | || |||||||| ||||||||||||||||| || || || || || | || || | Sbjct 578250 TAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGA 578191 Query 21591 AGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTAT 21650 | ||||| || ||||| ||||| || ||||| | |||||| | || | ||| |||| Sbjct 578190 AAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTAT 578131 Query 21651 CCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAG 21710 | |||||| || ||||| | |||||| | ||||||||| || | ||||||| Sbjct 578130 CACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAG 578071 Query 21711 CTTT---TAAAA---GATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764 | || ||||| | | | ||| |||| | ||| Sbjct 578070 CATTGAATAAAAATTCACGCTCTTTAGAATCTTTA----ATATATGTGTCAATTAATAGT 578015 Query 21765 NACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTG 21824 | ||| | ||||| ||||||||||| ||| || || || || ||||| || | | Sbjct 578014 GA--ATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAG 577957 Query 21825 CCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884 | |||| ||||||||| | |||| || | | || ||||| || || || |||| Sbjct 577956 CTTCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCAT 577897 Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA-- 21942 | || || ||||| || || | | |||||| | || || | | | |||| Sbjct 577896 CTGAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTC-ATCTTTATTAAGC 577838 Query 21943 --TTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCA-AAAGCT 21999 |||| |||||| | |||||| |||||| | |||||||| ||||| |||| | Sbjct 577837 TTATTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGAT 577778 Query 22000 AGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 || ||||||||||||||| |||||| || | | | ||||| || | ||||| Sbjct 577777 -GCTTCAGCCTTTTTATACATTTGCCAGATCTCGTGGAACTTAATTGGGAAGAGGACAAA 577719 Query 22060 CCTGTTATTTGATTCAACTAAAAGTGGTTCCATTG 22094 || | || ||| | ||||| ||| | ||||| Sbjct 577718 TCTTCTTTTATTTTCCATTAAAA-TGGGTTCATTG 577685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531899895768640