Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq14 253 2e-62
>seq14
Length=670130
Score = 253 bits (280), Expect = 2e-62
Identities = 595/902 (66%), Gaps = 9/902 (1%)
Strand=Plus/Plus
Query 21168 ttGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTC 21227
||| ||||| || | ||||||||||| |||||| ||||| || ||||| ||||| |
Sbjct 211664 TTGCCATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTAC 211723
Query 21228 CTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTAC 21287
| | | || ||| ||||||||| || || |||||| || | | | | || |||
Sbjct 211724 CAACAAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTAT 211783
Query 21288 AACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCAC 21347
|||| | | |||||||| || ||| |||| || ||||||||||| || || |
Sbjct 211784 TTCCCAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGC 211843
Query 21348 AATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGA 21407
|||||||||| | ||| ||||||||||| | || || | |||||| || |
Sbjct 211844 AATTCATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAA 211903
Query 21408 CGGCTTCA---ACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTT 21464
| |||||| |||||| | | | || || || | ||| || || ||
Sbjct 211904 CAGCTTCAGTGACAATTTTCTCGACAAT---AGCTGGATCAGGTTTATTTTGCAAGTGAG 211960
Query 21465 TAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAG 21524
|| | |||||| ||||||| ||| | ||||||||| | || || | ||||||||
Sbjct 211961 CGAATAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAG 212020
Query 21525 AAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTC 21584
|||| |||||||| |||||||| ||||||||||| ||||||||||| | ||||||| ||
Sbjct 212021 AAAAGGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATC 212080
Query 21585 CTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATT 21644
| || || || | || |||| | ||||| |||||||||||||| || || | ||
Sbjct 212081 CAGAGAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTT 212140
Query 21645 CTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTAT 21704
| | || |||||||| | ||| | ||||| | ||| ||||| || |
Sbjct 212141 CATCGTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGATGTTGA 212200
Query 21705 CAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764
|||| || || | |||| | ||||||| || | |||
Sbjct 212201 CAATTGCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTA 212260
Query 21765 NACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTG 21824
| || |||||||||||||||||||| || ||||| || || || |||| | | |
Sbjct 212261 CAGAGTAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGG 212320
Query 21825 CCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884
| || | | ||||||||| | |||| | | | || |||||||| || | ||||
Sbjct 212321 CTTCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCAT 212380
Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATT 21944
|| || |||||||| ||||||| || ||||| ||| || || || |||| |
Sbjct 212381 CAGATGCTGCAAAAAAAGCCAATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAACT 212440
Query 21945 ---TTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAG 22001
| | ||| || || ||| || | | ||| | ||| || || ||||| ||| ||
Sbjct 212441 TAGTGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAAG 212500
Query 22002 CAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACC 22061
| ||| || ||||| ||| || ||| |||| | |||||||| || ||||| |
Sbjct 212501 CCTCGTGCTTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAATC 212560
Query 22062 TG 22063
||
Sbjct 212561 TG 212562
Score = 230 bits (254), Expect = 2e-55
Identities = 652/995 (66%), Gaps = 38/995 (4%)
Strand=Plus/Minus
Query 21126 TTTAAAAATCAGCATCTAATGAGAAAA------CATTATCTTCtttttt------tGACA 21173
|||| ||||| |||| |||| ||| |||||||| | || || || ||
Sbjct 578667 TTTAGAAATCGTCATCAAATGCAAAAGAATCTTCATTATCTGCCTTATTAACACCTGCCA 578608
Query 21174 TAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCA 21233
||| || ||||||||||||| |||||| || |||||||| |||||||| || | |
Sbjct 578607 TAACACCGGCTTTTTGATAATCAGAAACTCTCTTCTCGAAAAAGTTTGTCTTACCAGCTA 578548
Query 21234 ATGATATAGATTCCATAAAATCAAATGGATTT-TCAGATT-TAAATATT-TTATTACAAC 21290
|||| ||| ||||| || ||||||||||| | | ||| ||||| || || ||||
Sbjct 578547 ATGAAATATTCTCCATGAAGTCAAATGGATTAGTAACATTGTAAATCTTCTTGTTAC--- 578491
Query 21291 CCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAAT 21350
| || | ||| | | ||| || ||| |||| | |||||||||||| || | ||||
Sbjct 578490 CTAGAGCAACTAAAAGACGATCGGCAACATATTCAACATATTGACACATCAAATTGCAAT 578431
Query 21351 TCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGG 21410
||||||| | ||| | |||||||| | ||| || | || || |||| || |
Sbjct 578430 TCATACCAAGTAATGAGGCTGGAAGAGCATCTGTAAAGTATTCCTTCTCAATAGTTACAG 578371
Query 21411 CTTCAACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACA 21470
| || |||||| ||| | || || | || || || || ||| |
Sbjct 578370 CCTCTGTAATTATCTTTTCAACAATAATTGGATCGGGTCTATTTTCCAAATGGGAAAATA 578311
Query 21471 TCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATG 21530
|| || ||||||||| || | ||||||||| | || || |||||||||||||| |
Sbjct 578310 ATAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAG 578251
Query 21531 TTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAA 21590
| | || |||||||| ||||||||||||||||| || || || || || | || || |
Sbjct 578250 TAAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGA 578191
Query 21591 AGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTAT 21650
| ||||| || ||||| ||||| || ||||| | |||||| | || | ||| ||||
Sbjct 578190 AAAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTAT 578131
Query 21651 CCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAG 21710
| |||||| || ||||| | |||||| | ||||||||| || | |||||||
Sbjct 578130 CACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAG 578071
Query 21711 CTTT---TAAAA---GATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764
| || ||||| | | | ||| |||| | |||
Sbjct 578070 CATTGAATAAAAATTCACGCTCTTTAGAATCTTTA----ATATATGTGTCAATTAATAGT 578015
Query 21765 NACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTG 21824
| ||| | ||||| ||||||||||| ||| || || || || ||||| || | |
Sbjct 578014 GA--ATATGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAG 577957
Query 21825 CCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884
| |||| ||||||||| | |||| || | | || ||||| || || || ||||
Sbjct 577956 CTTCTGGTGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCAT 577897
Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA-- 21942
| || || ||||| || || | | |||||| | || || | | | ||||
Sbjct 577896 CTGAAGCAGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTC-ATCTTTATTAAGC 577838
Query 21943 --TTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCA-AAAGCT 21999
|||| |||||| | |||||| |||||| | |||||||| ||||| |||| |
Sbjct 577837 TTATTTTCCCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGAT 577778
Query 22000 AGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059
|| ||||||||||||||| |||||| || | | | ||||| || | |||||
Sbjct 577777 -GCTTCAGCCTTTTTATACATTTGCCAGATCTCGTGGAACTTAATTGGGAAGAGGACAAA 577719
Query 22060 CCTGTTATTTGATTCAACTAAAAGTGGTTCCATTG 22094
|| | || ||| | ||||| ||| | |||||
Sbjct 577718 TCTTCTTTTATTTTCCATTAAAA-TGGGTTCATTG 577685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531899895768640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |