Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 181 3e-40 seq14 165 2e-35 seq7 93.3 1e-13 >seq1 Length=2214157 Score = 181 bits (200), Expect = 3e-40 Identities = 857/1351 (63%), Gaps = 38/1351 (3%) Strand=Plus/Minus Query 363373 GATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATC 363432 ||| || | ||| || | || || | ||| || | || | ||| ||||| | | | Sbjct 32576 GATTTCCAATATAATTTCTTTGGTTTTAAAACTCTTGAAAGATCATACCTTTTAAGACTT 32517 Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492 ||||| | ||| |||| | || || ||| | | ||| | |||||| ||||||| ||| Sbjct 32516 GATGGTAAAGTTGCTGAAAGACCACAACATTTAATTATGAGAGTTGCTGTTGGTATTCAT 32457 Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-----T 363547 | ||| |||| | |||||||| ||||| | ||| || || | | | Sbjct 32456 GGTGATGATATTGAAAAAGTCATTGAAACCTATAA---TTTAA-TG-TCATTAAAATATT 32402 Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607 |||| || || | || || | | |||||||| |||| | | ||||| |||||||||| Sbjct 32401 TCACTCATGCTTCTCCCACTTTATTTAATGCTGGTACTCCTCAACCACAAATGTCTTCTT 32342 Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667 | |||||| | ||||| || ||||| || || ||||| | ||| || | || | || Sbjct 32341 GTTTTCTTATTGCTATGAAAGAAGATTCAATTGAAGGTATTTATGATACTTTAAAAACTT 32282 Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCAC 363727 ||||| | ||||| || || || ||||||||| | || || ||| || | Sbjct 32281 GTGCTTTAATTTCAAAATCAGCTGGAGGAATTGGTCTTCATATTCATAATATTAG----A 32226 Query 363728 AGAACAG----TTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCT 363782 || || | ||| ||| || ||| || ||| || ||||| | |||| ||| | Sbjct 32225 AGTACTGGTTCTTATATTGCAGGTACAAATGG-TACATCTAATGGTATTATTCCAATGTT 32167 Query 363783 TCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGG 363840 ||||| ||| |||||||||| || || || || || ||||| | |||| | || Sbjct 32166 ACGTGTTTTTAACAATACTGCAAGATATGTTGATCAAGGTGGTAATAAAAGACC--TGGT 32109 Query 363841 GCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGG 363900 || ||||| |||||| | || || ||||| ||| ||||||| | | |||| | | Sbjct 32108 GCTTTTGCAATGTATTTGGAACCATGGCATGCTGATGTTTTTGATTATATTGATATTAGA 32049 Query 363901 AAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960 ||||| || ||||| ||| | | ||| | ||| | || ||| | ||| ||||| Sbjct 32048 AAAAATCATGGTAAAGAAGAAATTAGAGCAAGAGATTTATTTGCAGCATTATGGATTTCT 31989 Query 363961 GACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAA 364020 || ||||||| | || || | | | |||||| | |||| |||| | ||| Sbjct 31988 GATTTATTTATGAGAAGAGTTGAACAAAATGGTCAATGGTCATTATTTTCCCCAAATGAA 31929 Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 || |||||||| ||||| | ||||| || | || || |||| ||||| |||||| Sbjct 31928 GTCCCTGGTCTTTCAGATGTTTATGGTGATGAATTTGAAGCATTATATGAAAAATATGAA 31869 Query 364081 TCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 || || || ||| ||| |||||| || || || || |||| | | || |||| Sbjct 31868 AAAGAAGGTAAAGCTGTTAAAACAATTAAAGCTCAAAAACTTTGGTATTCAATTTTGGAA 31809 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 | || | || || || | || | |||| | || |||||| | || || || Sbjct 31808 GCACAAACAGAAACTGGTATTCCATTTATGCTTTATAAAGATGCATGTAATAAAAAAAGT 31749 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATA 364259 || || | | |||||||||| | | || | || ||||| || ||| ||||||| Sbjct 31748 AATCAAAAAAATCTTGGTACAA-TAAAAAGTTCAAATTTATGTTGTGAAATTGTTGAATA 31690 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | || ||||| || ||| || || || | || || | || | || | ||| | Sbjct 31689 TTCTGCACCCGATGAAGTTGCTGTTTGCAATTTAGCATCATTAGCATTACCAACATTTAT 31630 Query 364320 --------AAAAGATGGT----ACTTTTGACCACCAGCATCTTTATGACGTAACCTATCA 364367 || | | || | || | | || | ||| |||| | || | Sbjct 31629 TGATATTGAAGATAACGTTTCAATTTATAATTTTCAAAAACTTCATGATATTACAAAAGT 31570 Query 364368 TGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGA 364427 || | | | ||| | | || |||| || | ||||||||||||| || |||||| Sbjct 31569 TGTTGTTCGTAATTTAAATAAAATTATTGATAGGAATTATTATCCAGTTATTGAAGCAAG 31510 Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487 ||| |||||| | ||| | || |||| | | ||||| || || | ||||| | ||| Sbjct 31509 AAATTCAAATATGAGACATAGACCAATTGCTTTAGGTGTTCAAGGTTTAGCTGATGCTTT 31450 Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547 |||| || | |||||||||| ||||| ||| | |||| | | || || Sbjct 31449 TATGTGTCTTCGTTTACCATTTGATTCACCTGAAGCTAAATTATTAAACATTCAAATATT 31390 Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 |||||| || ||| ||| || | || || ||||| || |||||| ||| Sbjct 31389 TGAAACTATTTATCATGCTGCTGTTGAAGCATCATGTGAATTAGCAAAAGAATTAGGACC 31330 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAA 364667 || |||||||| || || || || || || | || || | |||| ||||||| Sbjct 31329 ATATGAAACTTATGAAGGATCACCAACATCTCAAGGTATTTTACAATATGATTTATGGAA 31270 Query 364668 TGTCACGCCATCTGTCCGATGGAACTGGGAT 364698 ||| ||| ||| | ||| | |||||| Sbjct 31269 TGTTCAACCAACTGAACTTTGGGATTGGGAT 31239 >seq14 Length=670130 Score = 165 bits (182), Expect = 2e-35 Identities = 499/757 (66%), Gaps = 44/757 (6%) Strand=Plus/Plus Query 22217 TAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCAT 22276 |||| || || ||| | |||| ||||| ||| || ||| |||| || ||| | Sbjct 577876 TAGCCTTTTTCGCTGCTTCAGATGGTATTGTTAACGAAAATTTAGTTGAAAACTTTTCGG 577935 Query 22277 CTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATG 22336 |||| ||||| ||||| || | || || |||||| | ||||| ||||| |||||| Sbjct 577936 CTGAGGTTCAAACACCAGAAGCTAAGTGCTTTTATGGTTTCCAAATCATGATGGAAAATA 577995 Query 22337 TTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACG---AAC 22393 | ||| | || |||||||| | || || | | || | || | |||||| || Sbjct 577996 TACACTCTGAGACATATTCACT-AT--TA-ATTGACACATATAT--TAAAGATTCTAAAG 578049 Query 22394 AACGAAACTT---ATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATT 22450 | || | || |||| || ||| | ||| | |||||||| |||||||||| Sbjct 578050 AGCGTGAATTTTTATTCAATGCTATTGAAAATGTTCCTTGTATTAAGAAGAAGGCAGATT 578109 Query 22451 GGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTG 22507 |||| | | |||||| | | || ||| | ||| || ||||||||| |||| || | Sbjct 578110 GGGCTTTAAGATGGATTAGTGATAAGGAAGCATTATTTGCTGAACGTCTTGTTGCTTTCG 578169 Query 22508 CTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaC 22567 ||| |||||||| ||||| || ||||| | || | || || ||| ||||||| Sbjct 578170 CTGCTGTTGAAGGTATTTTTTTCTCTGGTTCTTTCGCATCTATTTTCTGGTTAAAAAAGA 578229 Query 22568 GTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTC 22627 | | | ||||| || || || ||||| ||||| || || | || ||||| ||||||| Sbjct 578230 GAGGTTTAATGCCAGGCCTTACTTTTTCTAATGAATTGATCTGTCGTGATGAAGGTCTTC 578289 Query 22628 ATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACT--TCCATATGA 22685 | || |||||||| |||| ||| || | |||| ||| | || || Sbjct 578290 ACACTGATTTTGC----TTGCT-TAT---TATTTTCCCATTTGGAAAATAGACCCGATCC 578341 Query 22686 AACTGTACTTG---ATATTATTACAAATGCAGTTGAACT----TGAACGTCTATTTATTT 22738 || | | ||| | || |||||| | || || |||| ||| | || | || Sbjct 578342 AATTATTGTTGAAAAGATAATTACAGAGGCTGT--AACTATTGAGAAGGAATACT--TTA 578397 Query 22739 GCGAGGCGTTACCAGTAAGTCTCA----TTGGTATCAATGCCGAATCAATGAGTACATAT 22794 || || | || || |||| ||||||| ||| | | | ||| || |||| Sbjct 578398 CAGATGCTCTTCC----AGCCTCATTACTTGGTATGAATTGCAATTTGATGTGTCAATAT 578453 Query 22795 ATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTC 22854 || ||| |||||| |||||||| ||| || | || ||| | ||| ||| || || Sbjct 578454 GTTGAATATGTTGCCGATCGTCTTTTAGTTGCTCTAGGTAACAAGAAGATTTACAATGTT 578513 Query 22855 GTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAA 22914 |||||||||||| | ||||| ||||||| | | || ||||| || || ||||| Sbjct 578514 ACTAATCCATTTGACTTCATGGAGAATATTTCATTAGCTGGTAAGACAAACTTTTTCGAG 578573 Query 22915 AAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951 || |||||| ||| || |||||||| |||||||||| Sbjct 578574 AAGAGAGTTTCTGATTATCAAAAAGCCGGTGTTATGG 578610 >seq7 Length=1118252 Score = 93.3 bits (102), Expect = 1e-13 Identities = 251/384 (65%), Gaps = 9/384 (2%) Strand=Plus/Minus Query 12816 TACATATGTTGATCCAAATGTCAGAGAATCCATGTCTTCAGTTGCTGTGGCATACGCTTT 12875 || ||||| || |||||| | || |||||| || |||| || | |||||| |||| Sbjct 587359 TAGATATGGTGTTCCAAAGCATAAAGTATCCATATCCTCAGAAGCAGCGGCATATACTTT 587300 Query 12876 TCCTGTTTTTACATATGCAGCACATGTAGCTTCGGCCTCACATGGTGCTTGAACGACCGG 12935 ||| | |||| | | | |||||| ||| || |||||||| || || | ||| || Sbjct 587299 TCCAGCTTTTGCTAAAACTGCACATTGAGCCTCAGCCTCACAAGGAGCATTAACATATGG 587240 Query 12936 AATGCCCATTAGGGTTAGCATCTTTTTTACTTCTTCGCTATGTTCGCGAGTTGCGCGAAC 12995 ||||||||||| | || | ||||| |||||||| | ||||| | || | ||||| Sbjct 587239 AATGCCCATTAATTTAAGTAATTTTTTAGCTTCTTCGTTTTGTTCTCTTGTAACACGAAC 587180 Query 12996 GCTTCTCTTTTC------TTGTTTTTCGACTTCAGTTGCATCGTCGGTTAA---TTTTAG 13046 |||| ||||| ||| | ||||| | || | || || | Sbjct 587179 AGTTCTTTTTTCAAAACGGGAAACTTCTTCAGCAGTTCCTGTTTCTTTCAACGCTTCTGC 587120 Query 13047 TTCGGATAGTGCTTGTGCCTGTCGTTCATTTCGTTTATCAAGCTCTTTCTTTTTCAAAAC 13106 || | |||||| | | | ||| | ||||| |||| ||| ||||||| ||| Sbjct 587119 TTGCTTTTGTGCTTCTTCACGACGTGCTAAACGTTTTGCAAGTTCTCCGTTTTTCATAAC 587060 Query 13107 AGGTGGCTTTCCGTCAAAAACATAGACGGGTTTAATTCCTGCTTCAATTAATCGAATGGT 13166 ||||| | || ||||||||||| || ||||| || || ||||| | ||| | || Sbjct 587059 TGGTGGGTGGCCATCAAAAACATAAACCGGTTTTATACCATTATCAATAATTCGTAGTGT 587000 Query 13167 TCGGTAAAAAATACCTGTTAAATG 13190 || |||||| || || ||| ||| Sbjct 586999 TCTGTAAAACATCCCCATTAGATG 586976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351328906352