Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 9e-16 seq14 87.8 2e-12 seq8 87.8 2e-12 >seq12 Length=712717 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| |||||||| | ||||| ||||| | || || || | ||||| | || || || Sbjct 151158 AAAAAAAATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGAGGTTGA 151099 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 | | ||||| || || | |||||| ||||||| || || || || || ||||| Sbjct 151098 GTCATCTGACACTATTGATAATGTCAAATCAAAGATTCAAGATAAGGAGGGAATTCCTCC 151039 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163 |||||||| | |||||| | || |||||| | ||||||| | | | | | || Sbjct 151038 AGATCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACCTTATCTGA 150979 Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| ||||| || | ||||| || | ||||||||||| || Sbjct 150978 CTACAACATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAGGTGG 150925 >seq14 Length=670130 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661 |||| |||||||| ||||||||||| || | ||||||||||| | |||||| |||||| Sbjct 211696 ACTCTCTTTTCAAAGAAATTAGTCTTACCAACAAGAGAAATATTTTCCATAAAGTCGAAA 211755 Query 104662 GGATTCAAAG--TCTTAAAATATTTTTCGTAGCCAAGC-TCGATCAACAGTCGATCCGCC 104718 ||||| || || |||| |||| | | |||| ||| ||| || ||| || Sbjct 211756 GGATTTGTAGCATCATAAACCTTTTTATTTCCCAAAGCAACGAGCAA---TCTATCAGCA 211812 Query 104719 ACAAATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAA 104778 ||| |||| ||||| | ||||| | | |||||| || || | || ||| || | | Sbjct 211813 ACATATTCAATGTATTGACACATCAAGTCGCAATTCATACCAAGTAATGAGACAGGAAGA 211872 Query 104779 GCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 || | ||||| | ||||| || || | || ||||| Sbjct 211873 GCCTCGGTAAAGTATTCTTTTTCAATCACAACAGCTTC 211910 >seq8 Length=1087023 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || ||||| || || || ||| | ||||| |||| || || || Sbjct 676913 AATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATCCTC 676854 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || || ||| ||| ||||| ||||| || ||||| || || Sbjct 676853 TGACACTATTGACAATGTTAAGTCAAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCA 676794 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| ||| | || | | ||| || ||| | ||||| | | | | | || || || Sbjct 676793 ACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGACTACAA 676734 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||| ||||| || | ||||| || || ||||| ||||| || Sbjct 676733 CATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGG 676686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935287381080