Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq8 109 5e-19
seq21 98.7 8e-16
seq5 98.7 8e-16
>seq8
Length=1087023
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
|||||| || || |||||||| | || || ||||||||||| |||| || |||
Sbjct 676913 AATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATCCTC 676854
Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
|||||| ||| |||| || || ||||||| || || ||||| | || || |
Sbjct 676853 TGACACTATTG-ACAATGTTAAGTCAAAAATTCAAGACAAGGAAGGAATTCCTCCAGACC 676795
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
| |||||| | || | ||| || |||||||||||||| | ||| | | || || |
Sbjct 676794 AACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGACTACA 676735
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||||| || || ||| ||||| |||| |||||||| |||| ||
Sbjct 676734 ACATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGG 676686
>seq21
Length=453462
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||||||||| ||||| ||||| |||||||| || | || || |||||
Sbjct 371524 ATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAATCCAGT 371583
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| || | | | || ||| ||| || || || ||||| | ||| |||||
Sbjct 371584 GATACAATCGATAATGTTAAATCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATCAA 371643
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | | |||| ||| || |||||| ||||||||| || | | ||||| |||
Sbjct 371644 CAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGATTACAAC 371703
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|| ||||| |||||||| |||| |||| || ||||| |||| ||
Sbjct 371704 ATCCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATTAAGAGGTGG 371750
>seq5
Length=1301127
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||| |||||||||||||| || || || || || |||||| |||| |||||
Sbjct 1173875 AAGATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCA 1173816
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
||| ||| ||| |||| || || ||| || || || ||||| |||| ||
Sbjct 1173815 TCCGATACTATTG-ACAATGTTAAGTCAAAGATCCAGGACAAGGAAGGAATCCCTCCAGA 1173757
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| ||| | | || | ||| || || ||||||||||||| || | | |||||
Sbjct 1173756 CCAACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTA 1173697
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| ||||| || || ||| ||||| |||| |||||||| |||| ||
Sbjct 1173696 CAACATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGG 1173646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343294992320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |