Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq8 152 4e-32
seq5 120 3e-22
seq12 98.7 9e-16
>seq8
Length=1087023
Score = 152 bits (168), Expect = 4e-32
Identities = 182/241 (76%), Gaps = 7/241 (3%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|||||||| || || || || || |||||||||||| |||| || |||| || || ||
Sbjct 676915 ACAATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATCC 676856
Query 25056 TCTGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
||||||||||| || || || ||| |||||| ||| ||||| ||||| ||||| ||
Sbjct 676855 TCTGACACTATTGA--CAATGTTAAGTCAAAAATTCAA-GACAAGGAAGGAATTCCTCCA 676799
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
|||||||| | | || |||||||| |||||||||||||| | || || | ||
Sbjct 676798 GACCAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGAC 676739
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTAT 25232
||||| |||||||| |||||||| ||||||| || | || ||||||| || |||||
Sbjct 676738 TACAACATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGG-TATTAT 676680
Query 25233 T 25233
|
Sbjct 676679 T 676679
>seq5
Length=1301127
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || | |||||||| | || || |||| || ||||| ||
Sbjct 1173872 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCATCC 1173813
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||| || || || ||| ||| ||| ||||| ||||| || || || ||||
Sbjct 1173812 GATACTATTGA--CAATGTTAAGTCAAAGATCCAGGACAAGGAAGGAATCCCTCCAGACC 1173755
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || | || ||||| || || ||||||||||||| || ||| | |||||||
Sbjct 1173754 AACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTACA 1173695
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| ||||| || ||||||| || | || ||||||| ||
Sbjct 1173694 ACATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGG 1173646
Score = 86.0 bits (94), Expect = 5e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 25107 CCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTG 25166
||||| |||||||| || | |||||||| || || ||||||||||||| ||| || |
Sbjct 1113322 CCACCAGACCAACAACGTTTGATTTTTGCTGGTAAGCAATTAGAAGATGGTCGTACATTA 1113263
Query 25167 GGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226
|| ||||| || ||||| ||||| || || || ||||| || || || | || |||
Sbjct 1113262 TCTGACTACAACATCCAAAAGGAATCTACTCTTCACTTAGTTCTCAGACTTCGTGGTGGA 1113203
Query 25227 AATTA 25231
|||||
Sbjct 1113202 AATTA 1113198
>seq12
Length=712717
Score = 98.7 bits (108), Expect = 9e-16
Identities = 170/244 (70%), Gaps = 11/244 (5%)
Strand=Plus/Minus
Query 24986 ACAAAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGA 25045
|||||| || |||||| || ||||| || || | || || || | || || | ||
Sbjct 151161 ACAAAA---AAAAATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGA 151105
Query 25046 AGTGGAGTCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAG 25101
|| ||||| ||||||||||| || |||| || |||| | ||| || || || |
Sbjct 151104 GGTTGAGTCATCTGACACTATTGATAATGTCA---AATCAAAGATTCA-AGATAAGGAGG 151049
Query 25102 GGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCA 25161
| ||||| || || ||||| || | |||||||| || || ||||| ||||||| || |
Sbjct 151048 GAATTCCTCCAGATCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTA 150989
Query 25162 CTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAG 25221
| | || ||||| || ||||| ||||| || ||||||| || || || | ||||
Sbjct 150988 CCTTATCTGACTACAACATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAG 150929
Query 25222 GAGG 25225
| ||
Sbjct 150928 GTGG 150925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327281758840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |