Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq14 273 2e-68 >seq14 Length=670130 Score = 273 bits (302), Expect = 2e-68 Identities = 610/900 (68%), Gaps = 23/900 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||||||||| ||||| || || |||| | |||||||||||||| ||||| || | Sbjct 211668 CATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAAC 211727 Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907 | ||| || | || | || || ||||| | || | |||| ||||| | Sbjct 211728 AAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC 211787 Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967 ||| | | ||||||||||| ||| |||| ||||| ||| ||||||| || ||||| Sbjct 211788 CAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATT 211847 Query 92968 CATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGC 93027 ||| || || | ||||| ||||| ||||| ||| | ||||| || || ||||| || Sbjct 211848 CATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGC 211907 Query 93028 TTCTTTCAAGATTTCTATTACTCTA-CT--ATTTGGTGGTTTTTGTACGACATAATTGTA 93084 ||| | | |||| || || || || ||| ||||| | | | | | | Sbjct 211908 TTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAG---TGAGCGAA 211964 Query 93085 CATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAA 93144 | ||| || |||| || ||||||| |||||| ||||| | || | ||||| || Sbjct 211965 TAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAA 212024 Query 93145 TGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGa 93204 |||||||| || | | |||| || || | ||||||||| | |||||| ||||| Sbjct 212025 GGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGA 212084 Query 93205 aaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT 93264 ||||||| |||||| | | |||||| || || | ||||| |||| ||| || Sbjct 212085 GAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATC 212144 Query 93265 ACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGA 93323 | | |||||||| |||| ||| || || || | || ||||| || | |||| | | Sbjct 212145 GTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGA-TGTTGACAA 212203 Query 93324 TAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGA--TTAACAG 93381 | || |||| || | ||| || | |||| ||||| ||||| | | |||| Sbjct 212204 TTGCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAG 212263 Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441 || || |||||||||| | ||| || | || ||||| || ||||||| | | || Sbjct 212264 AG--TAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGC 212321 Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501 ||| | || || || ||| ||||| |||| || | ||||||||| || | |||||| Sbjct 212322 TTCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATC 212381 Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTT--TATAAAATGTTTCTCATCATCTTTAAGC 93559 ||||||||||||||||||| ||| ||| ||||| | |||||| || || | | Sbjct 212382 AGATGCTGCAAAAAAAGCCA--ATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAAC 212439 Query 93560 TTA---TCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616 ||| ||||| || | || ||| || | |||||| | ||| || |||||| || || Sbjct 212440 TTAGTGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAA 212499 Query 93617 GCTTC-TGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 || || ||| || |||||||| | ||| || || ||||| ||||||||| || ||||| Sbjct 212500 GCCTCGTGC-TTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAA 212558 Score = 262 bits (290), Expect = 4e-65 Identities = 413/591 (70%), Gaps = 3/591 (1%) Strand=Plus/Minus Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGT 93147 |||||| ||||| || || || | |||||| || || | ||||| ||||| || || Sbjct 578309 TAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGT 578250 Query 93148 TAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa 93207 | ||||| | | |||| || || | ||| || || || || ||| |||||| || Sbjct 578249 AAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAA 578190 Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT 93267 ||| |||||||| || || || || || |||| |||||| ||||| ||| ||| Sbjct 578189 AAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTATC 578130 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 || |||||| ||||||||||||| || || |||||||||||||| | |||| ||||| Sbjct 578129 ACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAGC 578070 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || |||| | || ||||| | |||||| || ||||| || ||||| || ||||| Sbjct 578069 ATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGTGAATA 578010 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | ||||| || | ||| ||||| |||||||| || || || || ||||||| | Sbjct 578009 TGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTTCTGG 577950 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 | || || || ||||| | || || | |||||| || || |||||||| || || Sbjct 577949 TGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAAGC 577890 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTA---TC 93564 || ||||| || || | | |||||| |||||| | ||||||||| || Sbjct 577889 AGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTATTTTC 577830 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 |||||| | |||||| | ||| | |||||| ||||||| || |||||||| || Sbjct 577829 CCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCTTCAGC 577770 Query 93625 TTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||| ||||| | ||| || || || | | |||||| || | |||||| Sbjct 577769 CTTTTTATACATTTGCCAGATCTCGTGGAACTTAATTGGGAAGAGGACAAA 577719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859853336640