Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq14 273 2e-68
>seq14
Length=670130
Score = 273 bits (302), Expect = 2e-68
Identities = 610/900 (68%), Gaps = 23/900 (3%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||||||||| ||||| || || |||| | |||||||||||||| ||||| || |
Sbjct 211668 CATAACACCTGTCTTTTGATAATCTGAAACTCTCTTTTCAAAGAAATTAGTCTTACCAAC 211727
Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
| ||| || | || | || || ||||| | || | |||| ||||| |
Sbjct 211728 AAGAGAAATATTTTCCATAAAGTCGAAAGGATTTGTAGCATCATAAACCTTTTTATTTCC 211787
Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967
||| | | ||||||||||| ||| |||| ||||| ||| ||||||| || |||||
Sbjct 211788 CAAAGCAACGAGCAATCTATCAGCAACATATTCAATGTATTGACACATCAAGTCGCAATT 211847
Query 92968 CATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGC 93027
||| || || | ||||| ||||| ||||| ||| | ||||| || || ||||| ||
Sbjct 211848 CATACCAAGTAATGAGACAGGAAGAGCCTCGGTAAAGTATTCTTTTTCAATCACAACAGC 211907
Query 93028 TTCTTTCAAGATTTCTATTACTCTA-CT--ATTTGGTGGTTTTTGTACGACATAATTGTA 93084
||| | | |||| || || || || ||| ||||| | | | | | |
Sbjct 211908 TTCAGTGACAATTTTCTCGACAATAGCTGGATCAGGTTTATTTTGCAAG---TGAGCGAA 211964
Query 93085 CATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAA 93144
| ||| || |||| || ||||||| |||||| ||||| | || | ||||| ||
Sbjct 211965 TAATAAACATCCAAAATCTGTATGTAGACCTTCATCTCGACAGATAAGTTCATTAGAAAA 212024
Query 93145 TGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGa 93204
|||||||| || | | |||| || || | ||||||||| | |||||| |||||
Sbjct 212025 GGTTAAACCAGGCATTAAACCTCTCTTTTTCAACCAAAATATGGCAGCAAATGATCCAGA 212084
Query 93205 aaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT 93264
||||||| |||||| | | |||||| || || | ||||| |||| ||| ||
Sbjct 212085 GAAAAATACACCTTCAATAGTTGCAAAAGCAACTAATCGTTCCCCAAATAATGCTTCATC 212144
Query 93265 ACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGA 93323
| | |||||||| |||| ||| || || || | || ||||| || | |||| | |
Sbjct 212145 GTCGTTAATCCATTTCAAAGTCCAGTCAGCCTTCTGTTTGATACATGGGA-TGTTGACAA 212203
Query 93324 TAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGA--TTAACAG 93381
| || |||| || | ||| || | |||| ||||| ||||| | | ||||
Sbjct 212204 TTGCATTAAGAAGAAAGTCTTTTTCAATAGGGTCTCTAATGTAAGTATCTAACTGTACAG 212263
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
|| || |||||||||| | ||| || | || ||||| || ||||||| | | ||
Sbjct 212264 AG--TAAGTTTCAGAATGTATATTTTCTGTCATGATCTGGAACCCATAGAAACTTTTGGC 212321
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
||| | || || || ||| ||||| |||| || | ||||||||| || | ||||||
Sbjct 212322 TTCAGGAATTTGAACCTCTGCTGAAAAGTTCTCAACTAAATTTTCATTAACAAGACCATC 212381
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTT--TATAAAATGTTTCTCATCATCTTTAAGC 93559
||||||||||||||||||| ||| ||| ||||| | |||||| || || | |
Sbjct 212382 AGATGCTGCAAAAAAAGCCA--ATACTCTTGAGATAAAGAATCTCTCATTTTCGTTTAAC 212439
Query 93560 TTA---TCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616
||| ||||| || | || ||| || | |||||| | ||| || |||||| || ||
Sbjct 212440 TTAGTGTCCCAGTCAGGTATATCCTTAGCAAGATCAATTTCCTCTGTAGTCCAGAAGGAA 212499
Query 93617 GCTTC-TGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675
|| || ||| || |||||||| | ||| || || ||||| ||||||||| || |||||
Sbjct 212500 GCCTCGTGC-TTCTTGTACATTTGCCAAATTTCACCATATTTAATTGGAAACATAACAAA 212558
Score = 262 bits (290), Expect = 4e-65
Identities = 413/591 (70%), Gaps = 3/591 (1%)
Strand=Plus/Minus
Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGT 93147
|||||| ||||| || || || | |||||| || || | ||||| ||||| || ||
Sbjct 578309 TAAGCAAGCAAAATCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTAGAAAAAGT 578250
Query 93148 TAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa 93207
| ||||| | | |||| || || | ||| || || || || ||| |||||| ||
Sbjct 578249 AAGGCCTGGCATTAAACCTCTCTTTTTTAACCAGAAAATAGATGCGAAAGAACCAGAGAA 578190
Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT 93267
||| |||||||| || || || || || |||| |||||| ||||| ||| |||
Sbjct 578189 AAAAATACCTTCAACAGCAGCGAAAGCAACAAGACGTTCAGCAAATAATGCTTCCTTATC 578130
Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
|| |||||| ||||||||||||| || || |||||||||||||| | |||| |||||
Sbjct 578129 ACTAATCCATCTTAAAGCCCAATCTGCCTTCTTCTTAATACAAGGAACATTTTCAATAGC 578070
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
|| |||| | || ||||| | |||||| || ||||| || ||||| || |||||
Sbjct 578069 ATTGAATAAAAATTCACGCTCTTTAGAATCTTTAATATATGTGTCAATTAATAGTGAATA 578010
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
| ||||| || | ||| ||||| |||||||| || || || || ||||||| |
Sbjct 578009 TGTCTCAGAGTGTATATTTTCCATCATGATTTGGAAACCATAAAAGCACTTAGCTTCTGG 577950
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
| || || || ||||| | || || | |||||| || || |||||||| || ||
Sbjct 577949 TGTTTGAACCTCAGCCGAAAAGTTTTCAACTAAATTTTCGTTAACAATACCATCTGAAGC 577890
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTA---TC 93564
|| ||||| || || | | |||||| |||||| | ||||||||| ||
Sbjct 577889 AGCGAAAAAGGCTAAGACGCGTGAAATAAAAAAACGCTCATCTTTATTAAGCTTATTTTC 577830
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
|||||| | |||||| | ||| | |||||| ||||||| || |||||||| ||
Sbjct 577829 CCAATCACCAATATCTTTACTTAAATCAATTTCTTCAGCAGTCCAGAAAGATGCTTCAGC 577770
Query 93625 TTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675
||||| ||||| | ||| || || || | | |||||| || | ||||||
Sbjct 577769 CTTTTTATACATTTGCCAGATCTCGTGGAACTTAATTGGGAAGAGGACAAA 577719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859853336640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |