Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq21 159 3e-34
seq8 159 3e-34
seq12 149 5e-31
seq5 138 1e-27
seq9 89.7 4e-13
>seq21
Length=453462
Score = 159 bits (176), Expect = 3e-34
Identities = 175/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| |||||||| || || |||| |||||||| |||||||||| || ||| |||
Sbjct 371522 AGATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAATCCA 371581
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
||||| | || || | ||| ||| || ||||||||||| || ||||| || ||||
Sbjct 371582 GTGATACAATCGATAATGTTAAATCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATC 371641
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
|||||||| | || ||||| || ||||| |||| ||| || || | || |||||||
Sbjct 371642 AACAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGATTACA 371701
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|||| ||||| || || ||| |||| || ||||| |||| | || ||| ||
Sbjct 371702 ACATCCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATTAAGAGGTGGTATT 371754
>seq8
Length=1087023
Score = 159 bits (176), Expect = 3e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| || ||||||||||| | ||||| || || ||| || |
Sbjct 676912 ATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATCCTCT 676853
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || |||||||||||||||||| || ||||| || || |||
Sbjct 676852 GACACTATTGACAATGTTAAGTCAAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAA 676793
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| ||||| ||||| || || ||| | || || ||||||
Sbjct 676792 CAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGACTACAAC 676733
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|||||||| |||||||| ||||||| |||||| |||| | || ||| ||
Sbjct 676732 ATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGGTATT 676682
>seq12
Length=712717
Score = 149 bits (164), Expect = 5e-31
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| |||||||||||||| | || || || || | |||||||| || || |
Sbjct 151155 AAAAATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGAGGTTGAGTC 151096
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || || | || || ||||| ||| |||||||| |||||||| ||||| || ||
Sbjct 151095 ATCTGACACTATTGATAATGTCAAATCAAAGATTCAAGATAAGGAGGGAATTCCTCCAGA 151036
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|||||||||| | || ||||| || || || || || ||| ||| ||| | || || ||
Sbjct 151035 TCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACCTTATCTGACTA 150976
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||| ||||| ||||| || ||||||| ||| | ||||| | || |||
Sbjct 150975 CAACATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAGGTGGT 150924
>seq5
Length=1301127
Score = 138 bits (152), Expect = 1e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| |||||||| ||||| | |||||||| || | || || || || || |
Sbjct 1173875 AAGATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCA 1173816
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
||||||| | ||| || | || ||| || || |||||||| || || || || ||
Sbjct 1173815 TCCGATACTATTGACAATGTTAAGTCAAAGATCCAGGACAAGGAAGGAATCCCTCCAGAC 1173756
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
||||||||| | || ||||| || || || ||||| ||| || || | || ||||||
Sbjct 1173755 CAACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTAC 1173696
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||||| ||||| ||||| || ||||||| |||||| ||||
Sbjct 1173695 AACATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATT 1173655
>seq9
Length=949999
Score = 89.7 bits (98), Expect = 4e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
||| | ||||||||||| || ||||| |||||||||||||| |||| | ||||| |||
Sbjct 831727 GTAGAAATGCAAATTTTCGTCAAAACGTTAACCGGTAAAACTATCACCTTAGAAGTTGAA 831668
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
| ||||||| | ||| | ||||| |||||||| || ||||| || ||||| ||
Sbjct 831667 TCATCCGATACTATTGACAACGTCAAATCCAAAATTCAGGATAAGGAAGGAATTCCCCCA 831608
Query 22333 GA 22334
||
Sbjct 831607 GA 831606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727304300840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |