Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq21 159 3e-34 seq8 159 3e-34 seq12 149 5e-31 seq5 138 1e-27 seq9 89.7 4e-13 >seq21 Length=453462 Score = 159 bits (176), Expect = 3e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| |||||||| || || |||| |||||||| |||||||||| || ||| ||| Sbjct 371522 AGATGCAGATTTTTGTCAAGACGCTAACGGGTAAAACCATCACTCTTGAGGTCGAATCCA 371581 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 ||||| | || || | ||| ||| || ||||||||||| || ||||| || |||| Sbjct 371582 GTGATACAATCGATAATGTTAAATCAAAGATCCAAGACAAGGAAGGAATTCCCCCAGATC 371641 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 |||||||| | || ||||| || ||||| |||| ||| || || | || ||||||| Sbjct 371642 AACAACGTTTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACTTTATCTGATTACA 371701 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 |||| ||||| || || ||| |||| || ||||| |||| | || ||| || Sbjct 371702 ACATCCAAAAGGAGTCTACCTTACACTTGGTTTTAAGATTAAGAGGTGGTATT 371754 >seq8 Length=1087023 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| || ||||||||||| | ||||| || || ||| || | Sbjct 676912 ATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATTACTCTCGAGGTTGAATCCTCT 676853 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || |||||||||||||||||| || ||||| || || ||| Sbjct 676852 GACACTATTGACAATGTTAAGTCAAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAA 676793 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| ||||| ||||| || || ||| | || || |||||| Sbjct 676792 CAAAGATTAATCTTTGCCGGTAAACAATTAGAAGACGGACGTACCTTATCTGACTACAAC 676733 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 |||||||| |||||||| ||||||| |||||| |||| | || ||| || Sbjct 676732 ATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGGTATT 676682 >seq12 Length=712717 Score = 149 bits (164), Expect = 5e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| |||||||||||||| | || || || || | |||||||| || || | Sbjct 151155 AAAAATGCAGATTTTTGTTAAAACCCTTACAGGGAAGACAATTACTCTTGAGGTTGAGTC 151096 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || || | || || ||||| ||| |||||||| |||||||| ||||| || || Sbjct 151095 ATCTGACACTATTGATAATGTCAAATCAAAGATTCAAGATAAGGAGGGAATTCCTCCAGA 151036 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 |||||||||| | || ||||| || || || || || ||| ||| ||| | || || || Sbjct 151035 TCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACCTTATCTGACTA 150976 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| ||||| ||||| || ||||||| ||| | ||||| | || ||| Sbjct 150975 CAACATCCAAAAGGAATCAACTTTACATTTGGTTCTCAGATTGAGAGGTGGT 150924 >seq5 Length=1301127 Score = 138 bits (152), Expect = 1e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| ||||| | |||||||| || | || || || || || | Sbjct 1173875 AAGATGCAGATTTTTGTCAAAACCCTTACCGGTAAGACTATTACCCTCGAGGTAGAGTCA 1173816 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 ||||||| | ||| || | || ||| || || |||||||| || || || || || Sbjct 1173815 TCCGATACTATTGACAATGTTAAGTCAAAGATCCAGGACAAGGAAGGAATCCCTCCAGAC 1173756 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||||||| | || ||||| || || || ||||| ||| || || | || |||||| Sbjct 1173755 CAACAACGTTTAATCTTTGCTGGTAAGCAATTAGAAGATGGACGTACTTTATCTGATTAC 1173696 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||||| ||||| ||||| || ||||||| |||||| |||| Sbjct 1173695 AACATCCAAAAGGAATCAACTTTACATTTGGTTTTGAGATT 1173655 >seq9 Length=949999 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 ||| | ||||||||||| || ||||| |||||||||||||| |||| | ||||| ||| Sbjct 831727 GTAGAAATGCAAATTTTCGTCAAAACGTTAACCGGTAAAACTATCACCTTAGAAGTTGAA 831668 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 | ||||||| | ||| | ||||| |||||||| || ||||| || ||||| || Sbjct 831667 TCATCCGATACTATTGACAACGTCAAATCCAAAATTCAGGATAAGGAAGGAATTCCCCCA 831608 Query 22333 GA 22334 || Sbjct 831607 GA 831606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727304300840